DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and ATH1

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_195024.1 Gene:ATH1 / 829435 AraportID:AT4G32980 Length:473 Species:Arabidopsis thaliana


Alignment Length:200 Identity:52/200 - (26%)
Similarity:82/200 - (41%) Gaps:55/200 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VNMVLDRHVRQNIQDMMHEAHVQASLLENEGRGRFHSDSSLDQDSLH------------------ 55
            :.||.||:     ...:.|.|...|        .||:.:.|| ..||                  
plant   281 LQMVDDRY-----SHCVDEIHTVIS--------AFHAATELD-PQLHTRFALQTVSFLYKNLRER 331

  Fly    56 -ADVIVEEDQSTEHGANQVQN---YH-----DMMVDSEHHIDINGSLRKRRGNLPKTSVKILKRW 111
             ...|:......|.|.::.|.   :|     ..:....|.|     .|.:|| ||:.||.:|:.|
plant   332 ICKKIISMGSVLERGKDKTQETSMFHQHCLLQQLKRKNHQI-----WRPQRG-LPEKSVSVLRNW 390

  Fly   112 LYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRR---GK 173
            ::::..:.||.|:||..|:..:.||..||.|||||||.|:...||     :.::..:::|   ..
plant   391 MFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVRLWKPMI-----EEMYAEMNKRKLNNS 450

  Fly   174 KVSPN 178
            .:.||
plant   451 HIQPN 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 17/37 (46%)
ATH1NP_195024.1 POX 196..334 CDD:214728 13/66 (20%)
Homeobox_KN 391..429 CDD:428673 17/37 (46%)

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