DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and Pbx4

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001020125.1 Gene:Pbx4 / 80720 MGIID:1931321 Length:378 Species:Mus musculus


Alignment Length:260 Identity:59/260 - (22%)
Similarity:101/260 - (38%) Gaps:74/260 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FHS-----DSSLDQDSLHADVIVEED--------QSTEHGANQVQNYHD-------------MMV 81
            :||     :.:..:.:.|...::.|.        :..||..|.:|:...             :|.
Mouse   143 YHSELEKYEQACREFTTHVTNLLREQSRVRPVSCREMEHMVNTIQSKFSAIQRQLKQSTCEAVMT 207

  Fly    82 DSEHHIDINGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFIN 146
            .....:|    .|::|.|..|.:..:|..:.|.|..|.|||:..|..|:::..:||.||.|||.|
Mouse   208 LRSRFLD----ARRKRRNFSKQATDVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGN 268

  Fly   147 ARRRILPEMIRREGNDPLH------FTISRRGKKVSPNCSRSSALGANLTGPNP-AHGSPASEVV 204
            .|.|......:.:....::      .|.:||.:..| :|..:.:.|.  .||.| .:||..    
Mouse   269 KRIRYKKNTGKFQEEATMYTGKASTVTKARRPRGQS-SCQSTPSPGP--CGPLPLTNGSDV---- 326

  Fly   205 VGATEEVDGAGEIHEGIANVLT-NFEQYVQGPNGQMVKMEPEYEDSVIYS-WQQAI---ANNPMG 264
                               ||| ....::|.|.|. |.::|     :::| ||:|.   |::|.|
Mouse   327 -------------------VLTLRTLAFLQPPTGG-VCLQP-----LVHSNWQRAAPQPASSPAG 366

  Fly   265  264
            Mouse   367  366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 17/37 (46%)
Pbx4NP_001020125.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
PBC 26..214 CDD:461052 9/70 (13%)
PBC-A. /evidence=ECO:0000255|PROSITE-ProRule:PRU01322 29..107
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..125
PBC-B. /evidence=ECO:0000255|PROSITE-ProRule:PRU01322 110..214 9/70 (13%)
homeodomain 216..276 CDD:238039 23/59 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..320 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..378 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.

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