Protein Alignment achi and Pknox2

DIOPT Version :10

• Sequence 1: NP_725183.1
• Gene: achi / 36373
• FlyBaseID: FBgn0033749
• Length: 555
• Species: Drosophila melanogaster
• Sequence 2: NP_001258207.1
• Gene: Pknox2 / 680549
• RGDID: 1590611
• Length: 475
• Species: Rattus norvegicus
• Alignment Length: 280
• Identity: 71/280 - (25%)
• Similarity: 118/280 - (42%)
• Gaps: 67/280 - (23%)

  Fly     3 SPEQEEVNMVLDRHVRQNIQDMMHEAHVQASLLENEGRGRFHSDSSLDQDSLHADVIVEE----- 62
            ||.|..:|:        :.||::..:....|.:.|..:|.....|:|.|.::....:..:
  Rat   185 SPNQPSINL--------HSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSGG 241

  Fly    63 ----------------DQSTEHGANQVQNYHDMMVDSEHHIDINGSL-------RKRRGNLPKTS 104
                            .|:...||.|:||       ::.::|:...|       :.:||.|||.:
  Rat   242 ALYQPVTMVTSQGQVVTQAIPQGAIQIQN-------TQVNLDLTSLLDNEDKKSKNKRGVLPKHA 299

  Fly   105 VKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTIS 169
            ..|::.||::|..:.||::.||..::.:.|||:|||.|||||||||||..|:.....||     :
  Rat   300 TNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDP-----A 359

  Fly   170 RRGKKVSPNCSRSSALGANLTGPNPAHGSPASEVVVGATEEVDGA-GEIHEGIANVLTNFEQYVQ 233
            .:.||:     :|.........||        .:..|..::..|. |...:|..| |.|. |.:.
  Rat   360 PKAKKI-----KSQHRPTQRFWPN--------SIAAGVLQQQGGTPGTNPDGSIN-LDNL-QSLS 409

  Fly   234 GPNGQMV---KMEPEYEDSV 250
            ..|..|.   .|...::||:
  Rat   410 SDNATMAMQQAMMAAHDDSL 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
achi	NP_725183.1	Homeobox_KN	112..150	CDD:428673	19/37 (51%)
Pknox2	NP_001258207.1	PLN02983	<3..>66	CDD:215533
		Meis_PKNOX_N	96..181	CDD:465140
		Homeobox_KN	307..345	CDD:428673	19/37 (51%)