DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and meis3

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001006782.1 Gene:meis3 / 448474 XenbaseID:XB-GENE-485337 Length:453 Species:Xenopus tropicalis


Alignment Length:224 Identity:62/224 - (27%)
Similarity:92/224 - (41%) Gaps:47/224 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 DQSTEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKF 127
            |.|:|.|.....:........:..:|.:....|:||..||.:..|::.||::|..:.|||:.:|.
 Frog   237 DNSSEQGDCMDNSVASPSTGDDDDLDRDKKRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKK 301

  Fly   128 TLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGP 192
            .|:|:..||:|||.||||||||||:..||.:                            :|.||.
 Frog   302 QLAQDTGLTILQVNNWFINARRRIVQPMIDQ----------------------------SNRTGQ 338

  Fly   193 NPAHGSPASEVVVGATEEVDGAGEIHEGIANVLTNFE----QYVQGPNGQMVKMEPEYEDSVIYS 253
            ..|..||..:.:.|...:    |:.|.||..  ..|:    .|...|:...:...|......|..
 Frog   339 GGAPYSPDGQNMGGYVMD----GQQHMGIRP--PGFQGIPGDYTAAPSTMPMGFPPAGYTPAIPP 397

  Fly   254 WQQAIANNPMGFQSLHSSL-----QATMI 277
            ....:.:.|    ||||.|     .|:||
 Frog   398 HSAGLRHGP----SLHSYLPGHPHHASMI 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 20/37 (54%)
meis3NP_001006782.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..64
Meis_PKNOX_N 102..186 CDD:465140
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..272 6/34 (18%)
Homeobox_KN 286..324 CDD:428673 20/37 (54%)
Blue background indicates that the domain is not in the aligned region.

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