Protein Alignment achi and Pbx2

DIOPT Version :10

• Sequence 1: NP_725183.1
• Gene: achi / 36373
• FlyBaseID: FBgn0033749
• Length: 555
• Species: Drosophila melanogaster
• Sequence 2: XP_063135418.1
• Gene: Pbx2 / 406164
• RGDID: 1303084
• Length: 643
• Species: Rattus norvegicus
• Alignment Length: 339
• Identity: 67/339 - (19%)
• Similarity: 119/339 - (35%)
• Gaps: 104/339 - (30%)

  Fly     2 ISPEQEEVNMVLDRHVRQNIQDMMH------EAHVQA---------SLLENEGRGRFHSDSSLDQ 51
            :||:    |.:.....|..:..:.|      |.:.||         :||..:.|.|..:...:::
  Rat   335 VSPD----NSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMER 395

  Fly    52 --DSLHADVIVEEDQSTEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGNLPKTSVKILKRWLYE 114
              ..:|......:.|..:.....|.......:|:          |::|.|..|.:.::|..:.|.
  Rat   396 MVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDA----------RRKRRNFSKQATEVLNEYFYS 450

  Fly   115 HRYNAYPSDAEKFTLSQEANLTVL----------------------------QVCNWFINARRRI 151
            |..|.|||:..|..|:::..:||.                            ||.|||.|.|.|.
  Rat   451 HLSNPYPSEEAKEELAKKCGITVSQVLRGLRRRYWERGPGERVPLDPLRPTPQVSNWFGNKRIRY 515

  Fly   152 LPEM--IRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPASEVVVGATEEVDGA 214
            ...:  .:.|.|            ..:...:.|.|.|.:....:|   :|.|....|.:..:.|:
  Rat   516 KKNIGKFQEEAN------------IYAVKTAVSVAQGGHSRTSSP---TPPSSAGSGGSFNLSGS 565

  Fly   215 GEIHEGIANVLTNFEQYVQGPNGQMVKME-----PEYEDSV----IYS---------WQQAIANN 261
            |::..|:..:  |.:.|   |..|:..:.     ..|.|::    |||         ||:|:..:
  Rat   566 GDMFLGMPGL--NGDSY---PASQVESLRHSMGPASYGDNIGGGQIYSPREMRANGGWQEAVTPS 625

  Fly   262 PM-----GFQSLHS 270
            .:     |..|:||
  Rat   626 SVTSPTEGPGSVHS 639

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
achi	NP_725183.1	Homeobox_KN	112..150	CDD:428673	17/65 (26%)
Pbx2	XP_063135418.1	None