DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment achi and irx1a

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_997067.1 Gene:irx1a / 403019 ZFINID:ZDB-GENE-040707-1 Length:426 Species:Danio rerio


Alignment Length:454 Identity:83/454 - (18%)
Similarity:141/454 - (31%) Gaps:180/454 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREG 160
            |..|..:.|...||.||.|||.|.||:..||..|:....:|:.||..||.|||||:         
Zfish   117 RPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL--------- 172

  Fly   161 NDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPASEVVVGATEEVDGAGEIHEGIANVL 225
                     ::..||:        .||.         |...|.:.|:..|               
Zfish   173 ---------KKENKVT--------WGAR---------SKDDENIFGSDNE--------------- 196

  Fly   226 TNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNPMGFQSLHSSLQATMIDKIKNYQMRKAAA 290
                       |...|.|.|.|                      ..|::..||||.:..      
Zfish   197 -----------GDAEKNEDEEE----------------------IDLESIDIDKIDDND------ 222

  Fly   291 IGGSAVGSGGAGGSSSNSSPATSILPYSLFGQLPPEFDDEEKPRPPKRVRTRTVAAKSPRENAKQ 355
                        |..||.                   :||:|....:.::.:..|:|.|.:    
Zfish   223 ------------GDQSNE-------------------EDEDKRAELESLQEKRHASKEPSD---- 252

  Fly   356 AKQKTGNKQETMYCYKDSYGGIVVSPRSEGEESAQGYESCGPNSEEEVRFETS------------ 408
                 ||...|........||..|...::.:..:....:..|:|.::   .||            
Zfish   253 -----GNNNTTRVLSPGRQGGFQVPVSNKPKIWSLAETATSPDSAQK---PTSPSVPVSHPAFLP 309

  Fly   409 ------------HDWQS----------VIKTVFGTEEVSTSAGNNPGTSGSKGSVQNTAIWNRNQ 451
                        |:|.:          .:::..|..:.:..|......:| ..|:|..:..|.::
Zfish   310 SHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHNHPAQQQQQQTG-PASLQVLSAGNTDK 373

  Fly   452 TAKRDVNQQLTDFESELNRIQASEIQTIDPTNSNQQDIGDNLQADEVFTGAEAEAGQSQLSAMS 515
            ..: |::.:..|.|:.|.....::     |..|:.:.:.|:.:..:       |:.|..|:|:|
Zfish   374 MPE-DLSPKHIDRENVLRNESPTQ-----PLKSSFRPLHDSPRNQQ-------ESTQRVLTALS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 19/38 (50%)
irx1aNP_997067.1 Homeobox_KN 132..171 CDD:283551 19/38 (50%)
IRO <276..289 CDD:214716 0/12 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.