DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and mirr

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster


Alignment Length:552 Identity:111/552 - (20%)
Similarity:196/552 - (35%) Gaps:131/552 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EGRGRFHSDSSLDQDSLHADVI-VEEDQSTEHGAN---QVQNYHDMMVD------SEHHIDINGS 92
            ||...:.|..:.||...:|:.. ::..::...||:   ....||.....      :.:.:|:||:
  Fly   162 EGMSAYLSGIAADQPPFYANPAGIDLKENLVAGASPWPYPSMYHPYDAAFAGYPFNSYGMDLNGA 226

  Fly    93 LRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEM-- 155
               ||.|..:.:...||.||.||:.|.||:..||..|:....:|:.||..||.|||||:..|.  
  Fly   227 ---RRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM 288

  Fly   156 --------------------IRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTG-PNPAHGSP 199
                                ...|.||.|....|..|.  :.:..||..||..:|. |..::.|.
  Fly   289 TWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVGS--TDDKDRSGRLGDMMTDRPGESNNSE 351

  Fly   200 ASEVVVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNPMG 264
            .||...|:.   :|:.::::              .|........|.:..:.::...:..|.:|..
  Fly   352 WSESRPGSP---NGSPDLYD--------------RPGSMPPGAHPLFHPAALHHHFRPPAGSPPD 399

  Fly   265 FQSLHSSLQATMIDKIKNYQMRKAAAIGGSA------VGSGGAGGSSSNSSPATSILPYSLFGQL 323
            ..:.|...|..:....:..|.....|:||:|      :....:..|..:||.|....|     :|
  Fly   400 IAAYHHHQQQLLQQHQQAQQNSLQTAVGGTAKPRIWSLADMASKDSKDSSSGAKDNHP-----EL 459

  Fly   324 PPEF-----DDEEKPRPPKRVRTRTVAAKSPRENAKQAKQKTGNKQETMYCYKDSYGGIVVSPRS 383
            ||..     ...::|.|.|.:  ..:||:.|..:.              |...|.|.|..     
  Fly   460 PPAHPGFYGHPGQQPSPGKIL--SPLAARIPNYSP--------------YVRPDLYRGFY----- 503

  Fly   384 EGEESAQGYESCGPNSEEEVRFE-------TSHD---------WQSVIKTV-----FGTEEVSTS 427
             |..:|.    .|..::|.:..:       .:|:         |::.:...     |....::||
  Fly   504 -GPAAAH----LGAPTQEFLEHQRTFGASLAAHNGPLGMNPLLWKAAVSGAANGHHFAPLSLTTS 563

  Fly   428 AGNNPGTSGSKGSVQNTAIWNRNQTAKRDVNQQLTDFESELNRIQASEIQTIDPTNSNQQDIGDN 492
            .|::.|...:...|.:.:..:.:.:...||....|      :..|::....:.|.:||......:
  Fly   564 GGSSGGQQVAPPPVASPSASSSSSSMGCDVVHIPT------SSGQSAAQHMMGPISSNSTASSSS 622

  Fly   493 LQADEVFTGAEAEAGQSQLSAM---SQGTSPD 521
            ..:.::..|...    :.|||.   ....|||
  Fly   623 SHSGKISPGVNV----TSLSAKPXHPSAASPD 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 17/37 (46%)
mirrNP_001261778.1 Homeobox_KN 243..281 CDD:428673 17/37 (46%)

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