DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and pbx3a

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_005171793.1 Gene:pbx3a / 387532 ZFINID:ZDB-GENE-031218-1 Length:457 Species:Danio rerio


Alignment Length:306 Identity:65/306 - (21%)
Similarity:115/306 - (37%) Gaps:84/306 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HVQASLLENEGRGRFHSDSSLDQ--DSLH---ADVIVEEDQSTEHGANQVQNYHDMMVDSEHHID 88
            ||. :||..:.|.|..|...:::  :.:|   :.:.::..|||         ...:|:.....:|
Zfish   168 HVM-NLLREQSRTRPISPKEIERMVNIIHRKFSSIQMQLKQST---------CEAVMILRSRFLD 222

  Fly    89 INGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEK--------FTLSQ--EANLTVLQVCNW 143
                .|::|.|..|.:.:||..:.|.|..|.|||:..|        .|:||  .:.:||.||.||
Zfish   223 ----ARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCAITVSQGKGSTITVSQVSNW 283

  Fly   144 FINARRR--------------------------ILPEMIRREGNDPL----HFTISRRGKKVSPN 178
            |.|.|.|                          :...:...:.|.|.    .|.:.....::...
Zfish   284 FGNKRIRYKKNIGKFQEEANLYAAKTAVTAAQAVAAAVQNSQNNSPATPSSGFQMKDEEFQLDAA 348

  Fly   179 CSRSSALGANLTGPNPAHGSPASEVVVGATEEVDGAGEIHEGIANVLTNFEQYVQGPN-----GQ 238
            ..:::.|....||.:.:|..|.|..:..:...::|:.:     :|.:|...| .||.:     ||
Zfish   349 EDKNNLLNNMFTGTSGSHSLPGSGDLFMSMSSLNGSYQ-----SNQVTGAGQ-TQGDSIRHAIGQ 407

  Fly   239 MVKMEPEYEDSVIYS---------WQQAI----ANNPM-GFQSLHS 270
            .:........:.:||         |..|:    ..:|: |..|:||
Zfish   408 SLGYSDGLRGNPLYSPHGLNGNGVWHDAVTPSSVTSPIEGTNSIHS 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 19/48 (40%)
pbx3aXP_005171793.1 PBC 32..222 CDD:281746 12/63 (19%)
homeodomain 224..294 CDD:238039 26/69 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587163
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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