Protein Alignment achi and Pbx4

DIOPT Version :10

• Sequence 1: NP_725183.1
• Gene: achi / 36373
• FlyBaseID: FBgn0033749
• Length: 555
• Species: Drosophila melanogaster
• Sequence 2: NP_001101869.1
• Gene: Pbx4 / 361131
• RGDID: 1305100
• Length: 379
• Species: Rattus norvegicus
• Alignment Length: 239
• Identity: 56/239 - (23%)
• Similarity: 94/239 - (39%)
• Gaps: 42/239 - (17%)

  Fly    29 HVQASLLENEGRGRFHSDSSLDQ--DSLHADVIVEEDQSTEHGANQVQNYHDMMVDSEHHIDING 91
            || .:||..:.|.|..|...::.  .::|:.....:.|..:.....|.......:|:
  Rat   161 HV-TNLLREQSRVRPVSSGEIEHMVSTIHSKFSAIQRQLKQSTCEAVMTLRSRFLDA-------- 216

  Fly    92 SLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMI 156
              |::|.|..|.:.::|..:.|.|..|.|||:..|..|:::..:||.||.|||.|.|       |
  Rat   217 --RRKRRNFSKQATEVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKR-------I 272

  Fly   157 RREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPASEVVVGATEEVDGAG--EIHE 219
            |.:.|.          .|.....:..:...:.:|....:.|..:.:    :|...|..|  .:..
  Rat   273 RYKKNT----------GKFQEEATMYTGKTSTVTKTRVSGGQTSCQ----STPSPDSCGPFPLTS 323

  Fly   220 GIANVLT-NFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNP 262
            |...||| ....::|.|.|. |.::|....    |||:|..:.|
  Rat   324 GSDMVLTLRTLAFLQPPPGG-VCLQPLAHG----SWQRATTSQP 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
achi	NP_725183.1	Homeobox_KN	112..150	CDD:428673	17/37 (46%)
Pbx4	NP_001101869.1	PBC	26..215	CDD:461052	10/54 (19%)
		homeodomain	217..277	CDD:238039	24/66 (36%)