DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and pbx4

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_571522.1 Gene:pbx4 / 30728 ZFINID:ZDB-GENE-000201-18 Length:343 Species:Danio rerio


Alignment Length:178 Identity:44/178 - (24%)
Similarity:79/178 - (44%) Gaps:32/178 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HVQASLLENEGRGRFHSDSSLDQ--DSLH---ADVIVEEDQSTEHGANQVQNYHDMMVDSEHHID 88
            ||. :||..:.|.|..|...:::  ..:|   :.:.::..|||         ...:|:.....:|
Zfish   176 HVM-NLLREQSRTRPISPKEIERMVAIIHRKFSSIQMQLKQST---------CEAVMILRSRFLD 230

  Fly    89 INGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILP 153
                .|::|.|..|.:.::|..:.|.|..|.|||:..|..|:::..:||.||.|||.|.|     
Zfish   231 ----ARRKRRNFNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKR----- 286

  Fly   154 EMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPAS 201
              ||.:.|      |.:..::.:....:::...||::.......|||:
Zfish   287 --IRYKKN------IGKFQEEANLYAVKTAVDAANVSAQASQANSPAT 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 17/38 (45%)
pbx4NP_571522.1 PBC 39..230 CDD:281746 12/63 (19%)
homeodomain 232..292 CDD:238039 24/66 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587171
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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