DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment achi and Irx4

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001100800.1 Gene:Irx4 / 306655 RGDID:1309309 Length:515 Species:Rattus norvegicus


Alignment Length:453 Identity:93/453 - (20%)
Similarity:148/453 - (32%) Gaps:132/453 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREG 160
            ||.|..:.:...||.||.|||.|.||:..||..|:....:|:.||..||.|||||:..|      
  Rat   146 RRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE------ 204

  Fly   161 NDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPASEVVVGATEEVDGAGEIHEGIANVL 225
                                      ..:|.| |.:.....:...|..|| :.||| .|.....|
  Rat   205 --------------------------NKMTWP-PRNKCADEKRPYGEGEE-EEAGE-EESREEPL 240

  Fly   226 TNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNPMGFQSLHSSLQATMIDKIKNYQMRKAAA 290
            .:.:.  :||.|   |.:.|.|.|.:..:      :|:..::....|:...              
  Rat   241 KSVKS--EGPAG---KEDKELELSDLEDF------DPLDTETSECELKTPF-------------- 280

  Fly   291 IGGSAVGSGGAGGSSSNSSPATSILPYSLFGQLPPEFDDEEKPRPPKRVRTRTVAAKSPRENAKQ 355
                              .|..|:..     ::||..|.      |...:...|..:.|...|..
  Rat   281 ------------------QPLDSVPE-----RIPPSSDG------PGTGKEAPVTLRMPLGTADG 316

  Fly   356 AKQKTGNKQETMYCYKDSYGGIVVSPRSEGEESAQGYES--------CGPNSEEEVR-FETSHDW 411
            |.. .|:.:....|.:.:    ||:|.|..|...|..|:        ..||.|.:.| :..:|..
  Rat   317 AVM-DGDLERARNCLRST----VVAPDSGAEGGPQACEAKLTFAPAGAPPNLETKPRIWSLAHTA 376

  Fly   412 QSVIKTVFGTEEVSTSAGNNPGTSGSKG--SVQNTAIWNRNQTAKRDVNQQLTDF---------- 464
            .:...|.....|..:......|::|:..  ...:.|:...:.|..|..:..:|..          
  Rat   377 TAAAATALSQTEFPSCMLKRQGSTGASAVTPASSPAVPAASGTLDRHQDSPVTSLRNWVDGVFHD 441

  Fly   465 ----ESELNRIQA-SEIQTIDPTNSNQQDIGDNLQADEVFTGAEAEAGQSQLSAMSQGTSPDE 522
                .|.||:..| ::...:||     ..:|.||       ||......:.|:...:.|.|.:
  Rat   442 PILRHSTLNQAWATAKGALLDP-----GPLGRNL-------GAGTNVLTTPLACSFRPTVPQD 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 19/38 (50%)
Irx4NP_001100800.1 Homeobox_KN 161..200 CDD:283551 19/38 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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