DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and meis2b

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_570985.1 Gene:meis2b / 30066 ZFINID:ZDB-GENE-000210-23 Length:393 Species:Danio rerio


Alignment Length:286 Identity:73/286 - (25%)
Similarity:106/286 - (37%) Gaps:103/286 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NMVLDRHVRQNIQ---------DMMHE-----AHVQASLLENEGRGRFHSDSSLDQ-DSLHADVI 59
            |..||..:.|:||         :.:||     .|...|.|    :|:...|..:|: |...:|..
Zfish   142 NPELDNLMIQSIQVLRFHLLELEKVHELCDNFCHRYISCL----KGKMPIDLVIDERDGCKSDFD 202

  Fly    60 VEEDQSTEHGANQVQNYHDMMVDSEH--------------HIDING------------SL----- 93
            .....||....:...::.||  |..|              |...:|            ||     
Zfish   203 DLSGSSTNLADHNPASWRDM--DDAHSTPSVGTPGPSSGGHASQSGDNSSELGDGLDNSLASPGT 265

  Fly    94 ----------RKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINAR 148
                      :|:||..||.:..|::.||::|..:.|||:.:|..|:|:..||.|||.|||||||
Zfish   266 GDEDDQDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTNLQVNNWFINAR 330

  Fly   149 RRILPEMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPASEVVVGATEEVDG 213
            |||:..||     |..:..:| :|...||:                  |.|....|:.       
Zfish   331 RRIVQPMI-----DQSNRAVS-QGTAYSPD------------------GQPMGGFVLD------- 364

  Fly   214 AGEIHEGIANVLTNFEQYVQGPNGQM 239
             |:.|.|:.         ..||.|.|
Zfish   365 -GQQHMGLR---------PGGPMGGM 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 20/37 (54%)
meis2bNP_570985.1 Meis_PKNOX_N 112..196 CDD:465140 14/57 (25%)
Homeobox_KN 294..332 CDD:428673 20/37 (54%)

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