DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and Pbx1

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_006496762.1 Gene:Pbx1 / 18514 MGIID:97495 Length:450 Species:Mus musculus


Alignment Length:309 Identity:76/309 - (24%)
Similarity:129/309 - (41%) Gaps:76/309 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HVQASLLENEGRGRFHSDSSLDQ--DSLH---ADVIVEEDQSTEHGANQVQNYHDMMVDSEHHID 88
            ||. :||..:.|.|..|...:::  ..:|   :.:.::..|||         ...:|:.....:|
Mouse   178 HVM-NLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQST---------CEAVMILRSRFLD 232

  Fly    89 INGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILP 153
                .|::|.|..|.:.:||..:.|.|..|.|||:..|..|:::..:||.||.|||.|.|     
Mouse   233 ----ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKR----- 288

  Fly   154 EMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHG----SPASEVVVGATE--EVD 212
              ||.:.|      |.:..::.:...::::....|::    |||    ||::....|::.  .:.
Mouse   289 --IRYKKN------IGKFQEEANIYAAKTAVTATNVS----AHGSQANSPSTPNSAGSSSSFNMS 341

  Fly   213 GAGEIHEGIANVLTNFEQYVQ-GPNGQ--------MVKMEPEYED----SVIYSWQQAIANNPMG 264
            .:|::...:.::..:..|..| |.|.|        ::.....|.|    |.:||        |.|
Mouse   342 NSGDLFMSVQSLNGDSYQGAQVGANVQSQVDTLRHVISQTGGYSDGLAASQMYS--------PQG 398

  Fly   265 FQSLHSSLQATMIDKIKNYQMRKAAAIGGSAVGSGG---AGGSSSNSSP 310
            . |..|.|.:.:     ||  |...|..|.|  :||   |...||.:||
Mouse   399 I-SAESRLSSYL-----NY--RSVFAKEGKA--NGGWQDATTPSSVTSP 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 17/38 (45%)
Pbx1XP_006496762.1 PBC 40..232 CDD:367661 12/63 (19%)
homeodomain 234..294 CDD:238039 25/66 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842736
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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