DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and ceh-60

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_509101.4 Gene:ceh-60 / 184803 WormBaseID:WBGene00017690 Length:360 Species:Caenorhabditis elegans


Alignment Length:315 Identity:64/315 - (20%)
Similarity:108/315 - (34%) Gaps:100/315 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EGRGRFHSDSSLDQDSLHADVIVEEDQSTEHGANQVQNYHDMM-VDSEHHIDINGSLRKR----- 96
            :|..|...|:.:.|..|..|:    :::..:....::|:.|.. :|.:...:|..|:.||     
 Worm    99 DGINRIKEDTIMKQIQLDKDM----EKALTNSEEVLRNHRDFRPIDEKDFSNIRQSISKRFEHSK 159

  Fly    97 ------------------------RGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTV 137
                                    |.|..|.:..||:.|.::||.|.||||.||..|:::.|:.:
 Worm   160 NNIRGEAATKILVLRREIEQQGRKRRNFDKNTTDILQNWFHDHRQNPYPSDQEKAELAKQCNIKI 224

  Fly   138 LQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPASE 202
            .||.|||.|.|.|...:.:|.:.::         .::.:...:.:.|:..:|.....|..|..|.
 Worm   225 SQVNNWFGNQRIRTKQQALRMQEDE---------RERAASMANEAQAIQNSLNSSTVASSSNMST 280

  Fly   203 VVVGATEEVDGAGEIHEGIANV-LTNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNPMGFQ 266
                            .|:.|: |.|                |..:..||.:.|..:..||..| 
 Worm   281 ----------------SGLINIPLVN----------------PTMQSMVIPAVQPGLLGNPNAF- 312

  Fly   267 SLHSSLQATMIDKIKNYQMRKAAAIGGSAVGSGGAGGSSSNSSPATSILPYSLFG 321
             ||.....|                      :||....:.|.:.......|..||
 Worm   313 -LHQPHYFT----------------------AGGQMSLNDNGNGQQFFTDYETFG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 19/38 (50%)
ceh-60NP_509101.4 COG5576 138..280 CDD:227863 35/150 (23%)
Homeobox_KN 198..237 CDD:368670 19/38 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157725
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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