DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and ceh-60

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_509101.4 Gene:ceh-60 / 184803 WormBaseID:WBGene00017690 Length:360 Species:Caenorhabditis elegans


Alignment Length:315 Identity:64/315 - (20%)
Similarity:108/315 - (34%) Gaps:100/315 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EGRGRFHSDSSLDQDSLHADVIVEEDQSTEHGANQVQNYHDMM-VDSEHHIDINGSLRKR----- 96
            :|..|...|:.:.|..|..|:    :::..:....::|:.|.. :|.:...:|..|:.||     
 Worm    99 DGINRIKEDTIMKQIQLDKDM----EKALTNSEEVLRNHRDFRPIDEKDFSNIRQSISKRFEHSK 159

  Fly    97 ------------------------RGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTV 137
                                    |.|..|.:..||:.|.::||.|.||||.||..|:::.|:.:
 Worm   160 NNIRGEAATKILVLRREIEQQGRKRRNFDKNTTDILQNWFHDHRQNPYPSDQEKAELAKQCNIKI 224

  Fly   138 LQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPASE 202
            .||.|||.|.|.|...:.:|.:.::         .::.:...:.:.|:..:|.....|..|..|.
 Worm   225 SQVNNWFGNQRIRTKQQALRMQEDE---------RERAASMANEAQAIQNSLNSSTVASSSNMST 280

  Fly   203 VVVGATEEVDGAGEIHEGIANV-LTNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNPMGFQ 266
                            .|:.|: |.|                |..:..||.:.|..:..||..| 
 Worm   281 ----------------SGLINIPLVN----------------PTMQSMVIPAVQPGLLGNPNAF- 312

  Fly   267 SLHSSLQATMIDKIKNYQMRKAAAIGGSAVGSGGAGGSSSNSSPATSILPYSLFG 321
             ||.....|                      :||....:.|.:.......|..||
 Worm   313 -LHQPHYFT----------------------AGGQMSLNDNGNGQQFFTDYETFG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 18/37 (49%)
ceh-60NP_509101.4 COG5576 138..280 CDD:227863 35/150 (23%)
Homeobox_KN 199..237 CDD:428673 18/37 (49%)

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