DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and irx-1

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_492533.2 Gene:irx-1 / 172789 WormBaseID:WBGene00007984 Length:377 Species:Caenorhabditis elegans


Alignment Length:210 Identity:55/210 - (26%)
Similarity:85/210 - (40%) Gaps:41/210 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GRFHSDSSLDQD-SLHADVIVEEDQSTEHGANQVQNY-HDMMVDSEHHIDING------------ 91
            |:||...::.|. :..|.......|:|..|...|..: |.:..|.:..:.:.|            
 Worm    41 GQFHFHPAMAQVLAAQAQAAAAAQQATLAGFPGVPMFPHGIPADLKPEMLLGGGPGPMPMFFSDA 105

  Fly    92 ----------SLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFIN 146
                      .::||  |..:.:...||.||:.||.|.|||.|:|..|:....:|:.||..||.|
 Worm   106 HRLYHPYGLDGIKKR--NATREATAPLKDWLHSHRKNPYPSKADKVMLAVGTGMTLTQVSTWFAN 168

  Fly   147 ARRRI--------LPEMIRREG----NDPLHFTISRRGKKVSPNCSR--SSALG-ANLTGPNPAH 196
            ||||:        .|:..|.:|    .|.....::|.....|.|..|  .|..| .:|..|.|:.
 Worm   169 ARRRLKKENKMTWSPQNRRGDGCDDDEDDDDDDMNRPSSSTSINSERKGESLFGKPHLASPTPSG 233

  Fly   197 GSPASEVVVGATEEV 211
            ||..|:.:....:|:
 Worm   234 GSGGSDELTTPKKEL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 18/37 (49%)
irx-1NP_492533.2 Homeobox_KN 134..172 CDD:428673 18/37 (49%)
IRO 259..>273 CDD:214716
Blue background indicates that the domain is not in the aligned region.

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