DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment achi and Meis1

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_034919.1 Gene:Meis1 / 17268 MGIID:104717 Length:465 Species:Mus musculus


Alignment Length:283 Identity:68/283 - (24%)
Similarity:108/283 - (38%) Gaps:68/283 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQEEVNMVLDRHVRQNIQDMMHEAHVQASLLENEGRGRFHSDSS--------LDQDSLHAD---- 57
            |.|:|:.:.|....:.|..:..:..:...:.:.||..:  |||.        .||.|.:.|    
Mouse   158 ELEKVHELCDNFCHRYISCLKGKMPIDLVIDDREGGSK--SDSEDVTRSANLTDQPSWNRDHDDT 220

  Fly    58 ----------------VIVEEDQSTEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGNLPKTSVK 106
                            .....|.|:|.|.....:........:...|.:....|:||..||.:..
Mouse   221 ASTRSGGTPGPSSGGHTSHSGDNSSEQGDGLDNSVASPSTGDDDDPDKDKKRHKKRGIFPKVATN 285

  Fly   107 ILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREG----------- 160
            |::.||::|..:.|||:.:|..|:|:..||:|||.||||||||||:..||.:..           
Mouse   286 IMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGTPYNP 350

  Fly   161 -NDPL---------HFTISRRGKKVSPN--CSRSSALGANL---------TGPNPA---HGSPAS 201
             ..|:         |..|...|.:..|.  .:|...:|.::         ..|:||   ||.|..
Mouse   351 DGQPMGGFVMDGQQHMGIRAPGLQSMPGEYVARGGPMGVSMGQPSYTQAQMPPHPAQLRHGPPMH 415

  Fly   202 EVVVGATEE---VDGAGEIHEGI 221
            ..:.|....   :...|:.|.|:
Mouse   416 TYIPGHPHHPAVMMHGGQPHPGM 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 21/38 (55%)
Meis1NP_034919.1 Meis_PKNOX_N 108..191 CDD:293102 5/32 (16%)
Homeobox_KN 290..329 CDD:283551 21/38 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842711
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.830

Return to query results.
Submit another query.