DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and meis1a

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_571972.2 Gene:meis1a / 170455 ZFINID:ZDB-GENE-020122-3 Length:380 Species:Danio rerio


Alignment Length:159 Identity:50/159 - (31%)
Similarity:68/159 - (42%) Gaps:32/159 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 DQSTEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKF 127
            |.|:|||....|:........|...|......|:||..||.:..|::.||::|..:.|||:.:|.
Zfish   231 DNSSEHGDFLDQSVASPSTGEEEDPDKERKNNKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKR 295

  Fly   128 TLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGP 192
            .|||:..||:|||.||||||||||:..||.:......|                        :||
Zfish   296 QLSQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVGH------------------------SGP 336

  Fly   193 NPAHGSPASEVVVGATEEVDGAGEIHEGI 221
            ......|....|:.        |:.|.||
Zfish   337 YTPDAQPMGGFVMD--------GQSHMGI 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 21/37 (57%)
meis1aNP_571972.2 Meis_PKNOX_N 99..183 CDD:465140
Homeobox_KN 280..318 CDD:428673 21/37 (57%)
Blue background indicates that the domain is not in the aligned region.

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