DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and meis2a

DIOPT Version :9

Sequence 1:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_009291615.1 Gene:meis2a / 170454 ZFINID:ZDB-GENE-020122-2 Length:409 Species:Danio rerio


Alignment Length:212 Identity:59/212 - (27%)
Similarity:93/212 - (43%) Gaps:39/212 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NIQDMMHEAHVQASLLENEGRGRFHSDSSLDQDSLHAD----------VIVEEDQSTEHGANQVQ 74
            |:.|.|....:::..|:|....|.|.|::    |.|:.          .....|.|:|.|.....
Zfish   205 NLADHMGNGWIRSDRLQNPASWRDHDDAT----STHSAGTPGPSSGGLASQSGDNSSEQGDGLDN 265

  Fly    75 NYHDMMVDSEHHIDINGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQ 139
            :........:...|.:...:|:||..||.:..|::.||::|..:.|||:.:|..|:|:..||:||
Zfish   266 SVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQ 330

  Fly   140 VCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPASEVV 204
            |.||||||||||:..||.:.         :|.|..:.|:.|:.:|..        ..|.|....|
Zfish   331 VNNWFINARRRIVQPMIDQS---------NRAGFLLDPSVSQGAAYS--------PEGQPMGSFV 378

  Fly   205 VGATEEVDGAGEIHEGI 221
            :.        |:.|.||
Zfish   379 LD--------GQQHMGI 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 21/38 (55%)
meis2aXP_009291615.1 Meis_PKNOX_N 106..189 CDD:293102
Homeobox_KN 302..341 CDD:283551 21/38 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587151
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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