DRSC/TRiP Functional Genomics Resources

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Protein Alignment achi and pbx2

DIOPT Version :10

Sequence 1:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001122133.1 Gene:pbx2 / 100101713 XenbaseID:XB-GENE-484669 Length:422 Species:Xenopus tropicalis


Alignment Length:298 Identity:71/298 - (23%)
Similarity:123/298 - (41%) Gaps:76/298 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RHVRQNIQDMMH---EAHVQA---------SLLENEGRGRFHSDSSLDQ--DSLH---ADVIVEE 62
            |:....|:.:.|   |.:.||         :||..:.|.|..|...:::  ..:|   :.:.::.
 Frog   155 RNKLSQIRQIYHAELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQL 219

  Fly    63 DQSTEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKF 127
            .|||         ...:|:.....:|    .|::|.|..|.:.::|..:.|.|..|.|||:..|.
 Frog   220 KQST---------CEAVMILRSRFLD----ARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKE 271

  Fly   128 TLSQEANLTVLQVCNWFINARRRILPEM--IRREGNDPLHFTISRRGKKVSPNCSRSSALGANL- 189
            .|:::..:||.||.|||.|.|.|....:  .:.|.|   .:.:     |.:.:.::....|||. 
 Frog   272 ELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEAN---IYAV-----KTAVSVAQGGHSGANSP 328

  Fly   190 TGPNPAHGSPASEVVVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMVK----MEPEYEDSV 250
            |.|..| ||       |.:..:.|:.::...:..:  |.:.|   |..|:..    |.|.|.||:
 Frog   329 TTPTSA-GS-------GGSFNLSGSNDMFMAMQGL--NGDSY---PPSQVESLRHTMGPGYSDSL 380

  Fly   251 ----IYS---------WQQAIANNPM-----GFQSLHS 270
                :||         ||:|:..:.:     |..|:||
 Frog   381 SANQMYSPREIRANGGWQEAVTPSSVTSPTEGPGSVHS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 17/37 (46%)
pbx2NP_001122133.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
PBC 46..236 CDD:461052 16/89 (18%)
PBC-A. /evidence=ECO:0000255|PROSITE-ProRule:PRU01322 49..128
PBC-B. /evidence=ECO:0000255|PROSITE-ProRule:PRU01322 131..236 16/89 (18%)
homeodomain 238..298 CDD:238039 23/59 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..341 9/29 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..422 18/71 (25%)
Blue background indicates that the domain is not in the aligned region.

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