DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vis and TGIF2LY

DIOPT Version :9

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_631960.1 Gene:TGIF2LY / 90655 HGNCID:18569 Length:185 Species:Homo sapiens


Alignment Length:141 Identity:55/141 - (39%)
Similarity:81/141 - (57%) Gaps:24/141 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 DMMVDSEHHVDINGSL------RKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLT 134
            |..:.|.::.|....|      :||:||||..|||||:.|:|:||:.||||:.||..||::.||:
Human    29 DTSIMSRNNADTGRVLALPEHKKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLS 93

  Fly   135 VLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVVGATEEVDGAGEIHEGIANVLTNFEQ 199
            :|::.||||||||||||:|:::..|||:   |..:..|...||.               |.:.|.
Human    94 LLRISNWFINARRRILPDMLQQRRNDPI---IGHKTGKDAHATH---------------LQSTEA 140

  Fly   200 YVQGPNGQMVK 210
            .|...:|.:|:
Human   141 SVPAKSGPVVQ 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 109..148 CDD:283551 22/38 (58%)
TGIF2LYNP_631960.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 8/28 (29%)
Homeobox_KN 68..107 CDD:310480 22/38 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..185
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152668
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D627308at33208
OrthoFinder 1 1.000 - - FOG0002434
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
54.810

Return to query results.
Submit another query.