DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and KNAT7

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_564805.1 Gene:KNAT7 / 842602 AraportID:AT1G62990 Length:291 Species:Arabidopsis thaliana


Alignment Length:204 Identity:46/204 - (22%)
Similarity:66/204 - (32%) Gaps:85/204 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DRHVRQNI------------KDLMHEAHVHA--------SLLNNEGRDRFHSDSSLDQDSLHAVV 58
            |||...|.            :.|.....|||        .:.||                ||::.
plant    86 DRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENN----------------LHSLT 134

  Fly    59 GNDLSTEQGANQVQNYHDMMVD---SEHHVDINGS------------------------------ 90
            |..|....||...::..|:.:|   ....||.:|.                              
plant   135 GATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLEL 199

  Fly    91 ---------------LRKRR-GNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVC 139
                           :|||| |.||..:..:||.|..:|....||::.:|..|.:|..|.:.|:.
plant   200 KQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQIN 264

  Fly   140 NWFINARRR 148
            |||||.|:|
plant   265 NWFINQRKR 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 14/37 (38%)
KNAT7NP_564805.1 KNOX1 29..67 CDD:461051
KNOX2 84..134 CDD:427506 12/63 (19%)
Homeobox_KN 235..273 CDD:428673 14/37 (38%)
Blue background indicates that the domain is not in the aligned region.

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