Protein Alignment vis and ATH1

DIOPT Version :10

• Sequence 1: NP_788337.1
• Gene: vis / 36372
• FlyBaseID: FBgn0033748
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_195024.1
• Gene: ATH1 / 829435
• AraportID: AT4G32980
• Length: 473
• Species: Arabidopsis thaliana
• Alignment Length: 232
• Identity: 55/232 - (23%)
• Similarity: 91/232 - (39%)
• Gaps: 80/232 - (34%)

  Fly     9 VNMVLDRHVRQNIKDLMHEAHVHASLLNNEGRDRFHSDSSLDQDSLHA----------------- 56
            :.||.||:     ...:.|.|...|        .||:.:.|| ..||.
plant   281 LQMVDDRY-----SHCVDEIHTVIS--------AFHAATELD-PQLHTRFALQTVSFLYKNLRER 331

  Fly    57 ----VVGNDLSTEQGANQVQN---YH-----DMMVDSEHHVDINGSLRKRRGNLPKSSVKILKRW 109
                ::......|:|.::.|.   :|     ..:....|.:     .|.:|| ||:.||.:|:.|
plant   332 ICKKIISMGSVLERGKDKTQETSMFHQHCLLQQLKRKNHQI-----WRPQRG-LPEKSVSVLRNW 390

  Fly   110 LYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVV 174
            ::::..:.||.|:||..|:..:.||..||.|||||||.|:...||     :.::..:::|
plant   391 MFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVRLWKPMI-----EEMYAEMNKR----- 445

  Fly   175 GATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMVKM 211
                              .|.|  .::| |||..::|
plant   446 ------------------KLNN--SHIQ-PNGPTLRM 461

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vis	NP_788337.1	Homeobox_KN	110..148	CDD:428673	17/37 (46%)
ATH1	NP_195024.1	POX	196..334	CDD:214728	13/66 (20%)
		Homeobox_KN	391..429	CDD:428673	17/37 (46%)