DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and KNAT5

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_194932.1 Gene:KNAT5 / 829335 AraportID:AT4G32040 Length:383 Species:Arabidopsis thaliana


Alignment Length:200 Identity:47/200 - (23%)
Similarity:75/200 - (37%) Gaps:57/200 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KDLMHEAHVHA----------------------------SLLNNEGRDRFHS-----DSSLDQDS 53
            :.|.|...|||                            ::.::|..::..|     |.|||...
plant   193 EQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSD 257

  Fly    54 LHAVVGNDLSTEQGANQV------------QNYHDMMVDSEHHVDINGSLRKRR-GNLPKSSVKI 105
            .....|..:.||:..:.:            |.:.:.:||....:     :|||| |.||..:..:
plant   258 CLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIVDIREEI-----MRKRRAGKLPGDTTSV 317

  Fly   106 LKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRG 170
            ||.|...|....||::.:|..|.||..|.:.|:.|||||.|:|      ....|.....|:::..
plant   318 LKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKR------NWNSNSSTSSTLTKNK 376

  Fly   171 KKVVG 175
            :|..|
plant   377 RKRTG 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 15/37 (41%)
KNAT5NP_194932.1 KNOX1 117..156 CDD:461051
KNOX2 170..221 CDD:427506 5/27 (19%)
ELK 281..302 CDD:427504 3/25 (12%)
Homeobox_KN 322..360 CDD:428673 15/37 (41%)
Blue background indicates that the domain is not in the aligned region.

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