DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vis and IRX3

DIOPT Version :9

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_005256196.1 Gene:IRX3 / 79191 HGNCID:14360 Length:529 Species:Homo sapiens


Alignment Length:363 Identity:74/363 - (20%)
Similarity:101/363 - (27%) Gaps:150/363 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPE----MI 154
            |..|..:.|...||.||.|||.|.||:..||..|:....:|:.||..||.|||||:..|    ..
Human   130 RPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWA 194

  Fly   155 RREGNDPLHFTISRRGKKVVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMVKMEPEYEDSV 219
            .|...|       ..|.......||.|...:..:|                    |.|.|.|:. 
Human   195 PRSRTD-------EEGNAYGSEREEEDEEEDEEDG--------------------KRELELEEE- 231

  Fly   220 IYSWQQAIANNPMGFQSLHSSLQATMIDKIKNYQMRKAAAIGGSAVGSGGAGGSSSNSSPATSIL 284
                                                   .:||....:||.|             
Human   232 ---------------------------------------ELGGEEEDTGGEG------------- 244

  Fly   285 PYSLFGQLPPEFDDEEKPRPPKRVRTRTVAAKSPRENAKQAKQKTGNKQETMYCYKDSYGGIVVS 349
                   |..:.:|||..     :.....||..|..:...|.::.|:.         ..|.|..|
Human   245 -------LADDDEDEEID-----LENLDGAATEPELSLAGAARRDGDL---------GLGPISDS 288

  Fly   350 PRSEGEESAQGYES-------------------------------CGPNSEEEVRFETSHDWQSV 383
            ..|:.|:|::|.|.                               |.|........:....|   
Human   289 KNSDSEDSSEGLEDRPLPVLSLAPAPPPVAVASPSLPSPPVSLDPCAPAPAPASALQKPKIW--- 350

  Fly   384 IKTVFGTEEVSTSAGN----NPGTSGSK--ASVQNTAI 415
                 ...|.:||..|    .||..||.  |:|..:|:
Human   351 -----SLAETATSPDNPRRSPPGAGGSPPGAAVAPSAL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 109..148 CDD:283551 19/38 (50%)
IRX3XP_005256196.1 Homeobox_KN 145..184 CDD:283551 19/38 (50%)
IRO 344..359 CDD:214716 3/22 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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