DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and Irx6

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_071873.2 Gene:Irx6 / 64379 MGIID:1927642 Length:439 Species:Mus musculus


Alignment Length:331 Identity:79/331 - (23%)
Similarity:113/331 - (34%) Gaps:94/331 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREG 158
            ||.|..:.|...||.||:|||.|.||:..||..|:....:|:.||..||.|||||     :::|.
Mouse   146 RRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-----LKKEN 205

  Fly   159 NDPLHFTISRRGKKVVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNG---------QMVKMEPE 214
            .    .|.:.:.|   |..|....:||...|..|..|......|...|         :..:.|.|
Mouse   206 K----MTWAPKNK---GGEERKADSGEDSLGCLNGDTKDATASQEARGLRLSDLEDLEEEEEEEE 263

  Fly   215 YEDSVIYSWQQAIANNPMGFQSLH---SSLQATMIDK------IKNYQMRKAAAIGGS---AVGS 267
            .|:....|..:.:|:.....|.|.   ::.|...::.      :..:...:|...|.:   ....
Mouse   264 AEEEAAVSAARRLADFQKSTQPLPAPCAAAQERCLESRECGLGLPRFSFTEAPQSGEADFITAEP 328

  Fly   268 GG---------------------AGGSSSNSSPATSILPYSLFGQLPPEFDDEE---KPRPPKRV 308
            ||                     |..|:..|:|:|           ||.....|   .||.|..:
Mouse   329 GGPTMILHYPSGHKPRIWSLAHTAAASAVESAPST-----------PPRAQSPECHMIPRQPSSI 382

  Fly   309 RTRTVAAKSPRENAKQAKQKTGNKQETMYCYKDSYGGIVVSPRSEGEESAQGYE-SCGP---NSE 369
            |...|...|..|....|.:..||...|:                      ||.. :|.|   ..|
Mouse   383 RRLLVPRDSEGEEDSPAAKAFGNSTFTL----------------------QGLPLNCAPYPRRRE 425

  Fly   370 EEVRFE 375
            .||||:
Mouse   426 PEVRFQ 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 18/37 (49%)
Irx6NP_071873.2 COG5576 <142..232 CDD:227863 35/97 (36%)
Homeobox_KN 162..200 CDD:428673 18/37 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..270 14/71 (20%)

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