Protein Alignment vis and pbx3b

DIOPT Version :9

• Sequence 1: NP_788337.1
• Gene: vis / 36372
• FlyBaseID: FBgn0033748
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_009302358.1
• Gene: pbx3b / 58140
• ZFINID: ZDB-GENE-000405-3
• Length: 471
• Species: Danio rerio
• Alignment Length: 309
• Identity: 67/309 - (21%)
• Similarity: 116/309 - (37%)
• Gaps: 83/309 - (26%)

  Fly    29 HVHASLLNNEGRDRFHSDSSLDQDSLHAVVGNDLSTEQGANQVQNYHDMMVDSEHHVDINGSLRK 93
            || .:||..:.|.|..|...:::  :.:::....|:.|...:......:|:.....:|    .|:
Zfish   181 HV-MNLLREQSRTRPISPKEIER--MVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLD----ARR 238

  Fly    94 RRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEAN----------LTVLQVCNWFINARRR 148
            :|.|..|.:.:||..:.|.|..|.|||:..|..|:::.:          :||.||.|||.|.|.|
Zfish   239 KRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQGVGTTITVAQVSNWFGNKRIR 303

  Fly   149 ILPEMIRREGNDPLHFTISRRGKKVVGATEE----------VDGAGEIHEGIANVLTNFEQYVQG 203
            .                     ||.:|..:|          |..|......:.|..||..   ..
Zfish   304 Y---------------------KKNIGKFQEEANLYAAKTAVTAAHAAAAAVQNSQTNSP---TT 344

  Fly   204 PNGQMVKMEPEYE-DSV---------IYSWQQAIANNP------MGFQSLH-SSLQA-------- 243
            ||......:.|:: ||.         :::......|.|      |..|:|: .|.|.
Zfish   345 PNSGFQMKDEEFQLDSAENKNTLLTNMFTGSSGSFNLPNSGDLFMSMQNLNGDSYQGAQVGANVQ 409

  Fly   244 TMIDKIKNYQMRKAA---AIGGSAV----GSGGAGGSSSNSSPATSILP 285
            :.:|.:::...:.|.   .:||:.:    |..|.||....::|::.|.|
Zfish   410 SQVDTLRHVISQTAGYNDVLGGNPMYSPHGLNGNGGWQDATTPSSVISP 458

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vis	NP_788337.1	Homeobox_KN	109..148	CDD:283551	17/48 (35%)
pbx3b	XP_009302358.1	PBC	42..235	CDD:281746	10/56 (18%)
		homeodomain	237..307	CDD:238039	25/90 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170587161
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930