Protein Alignment vis and pbx2

DIOPT Version :10

• Sequence 1: NP_788337.1
• Gene: vis / 36372
• FlyBaseID: FBgn0033748
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_017206849.1
• Gene: pbx2 / 58136
• ZFINID: ZDB-GENE-000405-5
• Length: 420
• Species: Danio rerio
• Alignment Length: 231
• Identity: 55/231 - (23%)
• Similarity: 93/231 - (40%)
• Gaps: 50/231 - (21%)

  Fly    29 HVHASLLNNEGRDRFHSDSSLDQDSLHAVVGNDLSTEQGANQVQNYHDMMVDSEHHVDINGSLRK 93
            || .:||..:.|.|..|...:::  :.|::....|:.|...:......:|:.....:|    .|:
Zfish   197 HV-MNLLREQSRTRPVSPREIER--MVAIIHRKFSSIQTQLKQSTCEAVMILRSRFLD----ARR 254

  Fly    94 RRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREG 158
            :|.|..|.:.::|..:.|.|..|.|||:..|..|:::.::||.||.|||.|.|.|....:.:.:.
Zfish   255 KRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKQCSITVSQVSNWFGNKRIRYKKNIGKYQE 319

  Fly   159 NDPLHFTISRRGKKVVGATEEVD--------GAGEIH-EGIANVLTNFEQYVQGPNGQMVKMEPE 214
            ...|:..     |..:|||:..|        |:|... .|.|:....    |...||:    :|.
Zfish   320 EANLYAM-----KTALGATQSEDSPHTPNSTGSGSFSLSGSADCFLG----VPPMNGE----QPP 371

  Fly   215 Y-------------------EDSVIYSWQQAIANNP 231
            |                   |.....:||:  .|:|
Zfish   372 YHMGAQDAQSRFSERLYITRESRTNGNWQE--QNSP 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vis	NP_788337.1	Homeobox_KN	110..148	CDD:428673	17/37 (46%)
pbx2	XP_017206849.1	PBC	61..251	CDD:461052	11/56 (20%)
		homeodomain	253..313	CDD:238039	23/59 (39%)