DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and Tgif2

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001128455.1 Gene:Tgif2 / 499929 RGDID:1560115 Length:237 Species:Rattus norvegicus


Alignment Length:93 Identity:61/93 - (65%)
Similarity:75/93 - (80%) Gaps:1/93 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DSEHHVDINGSLRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFIN 144
            :.|..:.:.|. |||||||||.|||||:.|||.||||||||:.||.:||.:.||:|||:||||||
  Rat     8 EDEGLLSLTGK-RKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFIN 71

  Fly   145 ARRRILPEMIRREGNDPLHFTISRRGKK 172
            ||||:||:|:|::|.||..|||||||.|
  Rat    72 ARRRLLPDMLRKDGKDPNQFTISRRGGK 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 27/37 (73%)
Tgif2NP_001128455.1 Homeobox_KN 37..75 CDD:428673 27/37 (73%)

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