Protein Alignment vis and pbx3a

DIOPT Version :9

• Sequence 1: NP_788337.1
• Gene: vis / 36372
• FlyBaseID: FBgn0033748
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_005171793.1
• Gene: pbx3a / 387532
• ZFINID: ZDB-GENE-031218-1
• Length: 457
• Species: Danio rerio
• Alignment Length: 312
• Identity: 69/312 - (22%)
• Similarity: 107/312 - (34%)
• Gaps: 101/312 - (32%)

  Fly    29 HVHASLLNNEGRDRFHSDSSLDQDSLHAVVGNDLSTEQGANQVQNYHDMMVDSEHHVDINGSLRK 93
            || .:||..:.|.|..|...:::  :..::....|:.|...:......:|:.....:|    .|:
Zfish   168 HV-MNLLREQSRTRPISPKEIER--MVNIIHRKFSSIQMQLKQSTCEAVMILRSRFLD----ARR 225

  Fly    94 RRGNLPKSSVKILKRWLYEHRYNAYPSDAEK--------FTLSQ--EANLTVLQVCNWFINARRR 148
            :|.|..|.:.:||..:.|.|..|.|||:..|        .|:||  .:.:||.||.|||.|.|.|
Zfish   226 KRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCAITVSQGKGSTITVSQVSNWFGNKRIR 290

  Fly   149 ILPEMIRREGNDPLHFTISRRGKKVVGATEE----------VDGAGEIHEGIANVLTNFEQYVQG 203
            .                     ||.:|..:|          |..|..:...:.|...|..   ..
Zfish   291 Y---------------------KKNIGKFQEEANLYAAKTAVTAAQAVAAAVQNSQNNSP---AT 331

  Fly   204 PNGQMVKMEPEY-----EDSVIYSWQQAIANNP-----------------MGFQSLHSSLQATMI 246
            |:......:.|:     ||      :..:.||.                 |...||:.|.|:..:
Zfish   332 PSSGFQMKDEEFQLDAAED------KNNLLNNMFTGTSGSHSLPGSGDLFMSMSSLNGSYQSNQV 390

  Fly   247 --------DKIKNYQMRKAAAIGGSAVGSGGAGGSSSNSSPATSILPYSLFG 290
                    |.|::       |||.|...|.|..|:...|       |:.|.|
Zfish   391 TGAGQTQGDSIRH-------AIGQSLGYSDGLRGNPLYS-------PHGLNG 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vis	NP_788337.1	Homeobox_KN	109..148	CDD:283551	19/48 (40%)
pbx3a	XP_005171793.1	PBC	32..222	CDD:281746	10/56 (18%)
		homeodomain	224..294	CDD:238039	27/90 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170587164
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930