DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vis and achi

DIOPT Version :9

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001286352.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster


Alignment Length:555 Identity:506/555 - (91%)
Similarity:512/555 - (92%) Gaps:31/555 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MISPEQEEVNMVLDRHVRQNIKDLMHEAHVHASLLNNEGRDRFHSDSSLDQDSLHA--VVGNDLS 63
            |||||||||||||||||||||:|:||||||.||||.||||.|||||||||||||||  :|..|.|
  Fly     1 MISPEQEEVNMVLDRHVRQNIQDMMHEAHVQASLLENEGRGRFHSDSSLDQDSLHADVIVEEDQS 65

  Fly    64 TEQGANQVQNYHDMMVDSEHHVDINGSLRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLS 128
            ||.||||||||||||||||||:|||||||||||||||:|||||||||||||||||||||||||||
  Fly    66 TEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLS 130

  Fly   129 QEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKK--------------------- 172
            ||||||||||||||||||||||||||||||||||||||||||||                     
  Fly   131 QEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPA 195

  Fly   173 --------VVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIAN 229
                    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 HGSPASEVVVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIAN 260

  Fly   230 NPMGFQSLHSSLQATMIDKIKNYQMRKAAAIGGSAVGSGGAGGSSSNSSPATSILPYSLFGQLPP 294
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   261 NPMGFQSLHSSLQATMIDKIKNYQMRKAAAIGGSAVGSGGAGGSSSNSSPATSILPYSLFGQLPP 325

  Fly   295 EFDDEEKPRPPKRVRTRTVAAKSPRENAKQAKQKTGNKQETMYCYKDSYGGIVVSPRSEGEESAQ 359
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   326 EFDDEEKPRPPKRVRTRTVAAKSPRENAKQAKQKTGNKQETMYCYKDSYGGIVVSPRSEGEESAQ 390

  Fly   360 GYESCGPNSEEEVRFETSHDWQSVIKTVFGTEEVSTSAGNNPGTSGSKASVQNTAIWNRNQTAKR 424
            ||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
  Fly   391 GYESCGPNSEEEVRFETSHDWQSVIKTVFGTEEVSTSAGNNPGTSGSKGSVQNTAIWNRNQTAKR 455

  Fly   425 DVNQQLTDFESELNIIQASEIQTIDPTNSNQQDIGDNLQADEVFTGAEAEAGQSQLSALSQGTSS 489
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||:|||||.
  Fly   456 DVNQQLTDFESELNRIQASEIQTIDPTNSNQQDIGDNLQADEVFTGAEAEAGQSQLSAMSQGTSP 520

  Fly   490 DEEGKYKCLYYLVETAMAVRQNDDVQDDDFVYMGD 524
            ||..|||||||||||||||||||||||||||||||
  Fly   521 DERAKYKCLYYLVETAMAVRQNDDVQDDDFVYMGD 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 109..148 CDD:283551 38/38 (100%)
achiNP_001286352.1 Homeobox_KN 111..150 CDD:283551 38/38 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443633
Domainoid 1 1.000 71 1.000 Domainoid score I9384
eggNOG 1 0.900 - - E1_KOG0773
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 255 1.000 Inparanoid score I5552
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1573375at2759
OrthoFinder 1 1.000 - - FOG0002434
OrthoInspector 1 1.000 - - mtm6538
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2583
109.900

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