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Protein Alignment vis and Meis3
DIOPT Version :9
Sequence 1: | NP_788337.1 |
Gene: | vis / 36372 |
FlyBaseID: | FBgn0033748 |
Length: | 524 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038937577.1 |
Gene: | Meis3 / 361514 |
RGDID: | 1308532 |
Length: | 443 |
Species: | Rattus norvegicus |
Alignment Length: | 173 |
Identity: | 52/173 - (30%) |
Similarity: | 78/173 - (45%) |
Gaps: | 28/173 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 IKDLMHEAHVH--------ASLLNNEGRDRFHSDSSLDQDSLHAV-------VGNDLSTEQGANQ 70
|:|......|| ..|.:..| |:|.||....|| .|:.|.|...:
Rat 258 IRDHEDSGSVHLGTPGPSSGGLASQSG------DNSSDQVWCLAVQWGMCPSPGDGLDTSVAS-- 314
Fly 71 VQNYHDMMVDSEHHVDINGSLRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTV 135
......:..:|:.....|:||..||.:..|::.||::|..:.|||:.:|..|:|:..||:
Rat 315 -----PSSAGEDEDLDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTI 374
Fly 136 LQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVVGATE 178
|||.||||||||||:..||.:........:.:..|:.:.|.||
Rat 375 LQVNNWFINARRRIVQPMIDQSNRTGQGASFNPEGQSMAGYTE 417
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166346187 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0773 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.740 |
|
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