DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and tgif1

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_955861.1 Gene:tgif1 / 321756 ZFINID:ZDB-GENE-030131-475 Length:273 Species:Danio rerio


Alignment Length:123 Identity:68/123 - (55%)
Similarity:84/123 - (68%) Gaps:22/123 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DQDSLHAVVGNDLSTEQGANQVQNYHDMMVDSEHHVDINGSLRKRRGNLPKSSVKILKRWLYEHR 114
            |:|||.  |..|||:..|                   ::|. |||||||||.||:||:.|||:||
Zfish    17 DEDSLD--VPLDLSSNGG-------------------VSGK-RKRRGNLPKESVQILRDWLYQHR 59

  Fly   115 YNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKK 172
            ||||||:.||..||::.:|:.|||||||||||||:||||:|::|.||..|||||||.|
Zfish    60 YNAYPSEQEKALLSKQTHLSTLQVCNWFINARRRLLPEMLRKDGKDPNQFTISRRGSK 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 26/37 (70%)
tgif1NP_955861.1 Homeobox_KN 55..93 CDD:428673 26/37 (70%)

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