Protein Alignment vis and Meis2

DIOPT Version :9

• Sequence 1: NP_788337.1
• Gene: vis / 36372
• FlyBaseID: FBgn0033748
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_038960864.1
• Gene: Meis2 / 311311
• RGDID: 1305198
• Length: 496
• Species: Rattus norvegicus
• Alignment Length: 262
• Identity: 74/262 - (28%)
• Similarity: 114/262 - (43%)
• Gaps: 46/262 - (17%)

  Fly     9 VNMVLDRHVRQNIKDLMHEAHVHASLLN----NEGRDRFHSDSSLDQDS--------LHAVVGND 61
            :::|:|.....:..|  || .:..|..|    |....|.|.|::....:        .||....|
  Rat   204 IDLVIDERDGSSKSD--HE-ELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGD 265

  Fly    62 LSTEQGANQVQNYHDMMVDSEHHVDINGSLRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFT 126
            .|:|||.....:........:...|.:...:|:||..||.:..|::.||::|..:.|||:.:|..
  Rat   266 NSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQ 330

  Fly   127 LSQEANLTVLQVCNWFINARRRILPEMIRREGN-----DPLHFTISRRGKKVVGATEEVDGA--- 183
            |:|:..||:|||.||||||||||:..||.:...     ||   ::|:      ||....:|.
  Rat   331 LAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDP---SVSQ------GAAYSPEGQPMG 386

  Fly   184 -----GEIHEGI--ANVLTNFEQYVQ--GPNGQMVKMEPEYEDSVIYSWQQAIANNPMGFQSLHS 239
                 |:.|.||  |.:.:....||.  ||.| |...:|.|....:......:.:.|    .:||
  Rat   387 SFVLDGQQHMGIRPAGLQSMPGDYVSQGGPVG-MGMAQPSYTPPQMTPHPTQLRHGP----PMHS 446

  Fly   240 SL 241
            .|
  Rat   447 YL 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vis	NP_788337.1	Homeobox_KN	109..148	CDD:283551	21/38 (55%)
Meis2	XP_038960864.1	Meis_PKNOX_N	129..213	CDD:406806	2/8 (25%)
		Homeobox_KN	313..352	CDD:399131	21/38 (55%)
		PAT1	<354..>482	CDD:401645	25/109 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166346196
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0773
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.740