Protein Alignment vis and Meis1

DIOPT Version :10

• Sequence 1: NP_788337.1
• Gene: vis / 36372
• FlyBaseID: FBgn0033748
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_034919.1
• Gene: Meis1 / 17268
• MGIID: 104717
• Length: 465
• Species: Mus musculus
• Alignment Length: 205
• Identity: 64/205 - (31%)
• Similarity: 94/205 - (45%)
• Gaps: 34/205 - (16%)

  Fly    32 ASLLNNEGRDRFHSDSSLDQ--------DSLHAVVGNDLSTEQGANQVQNYHDMMVDSEHHVDIN 88
            |:|.:....:|.|.|::..:        ...|.....|.|:|||.....:........:...|.:
Mouse   205 ANLTDQPSWNRDHDDTASTRSGGTPGPSSGGHTSHSGDNSSEQGDGLDNSVASPSTGDDDDPDKD 269

  Fly    89 GSLRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEM 153
            ....|:||..||.:..|::.||::|..:.|||:.:|..|:|:..||:|||.||||||||||:..|
Mouse   270 KKRHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPM 334

  Fly   154 IRREGNDPLHFTISRRGKKVVGATEEVDGA--------GEIHEGI-ANVLTNFE-QYVQ--GPNG 206
            |     |..:..:|:      |.....||.        |:.|.|| |..|.:.. :||.  ||.|
Mouse   335 I-----DQSNRAVSQ------GTPYNPDGQPMGGFVMDGQQHMGIRAPGLQSMPGEYVARGGPMG 388

  Fly   207 QMVKM-EPEY 215
              |.| :|.|
Mouse   389 --VSMGQPSY 396

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vis	NP_788337.1	Homeobox_KN	110..148	CDD:428673	20/37 (54%)
Meis1	NP_034919.1	Meis_PKNOX_N	108..192	CDD:465140
		Homeobox_KN	291..329	CDD:428673	20/37 (54%)
		PABP-1234	<326..457	CDD:130689	27/84 (32%)