DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and mirr

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_315118.4 Gene:mirr / 1275837 VectorBaseID:AGAMI1_011860 Length:575 Species:Anopheles gambiae


Alignment Length:72 Identity:29/72 - (40%)
Similarity:42/72 - (58%) Gaps:3/72 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SEHHVDINGSLRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINA 145
            :.:.:|:||:   ||.|..:.:...||.||.||:.|.||:..||..|:....:|:.||..||.||
Mosquito   204 NSYGMDLNGA---RRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 265

  Fly   146 RRRILPE 152
            |||:..|
Mosquito   266 RRRLKKE 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 17/37 (46%)
mirrXP_315118.4 COG5576 <202..>284 CDD:227863 29/72 (40%)
Homeobox_KN 230..268 CDD:428673 17/37 (46%)

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