DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and LOC100535338

DIOPT Version :9

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_005168761.1 Gene:LOC100535338 / 100535338 -ID:- Length:377 Species:Danio rerio


Alignment Length:390 Identity:105/390 - (26%)
Similarity:160/390 - (41%) Gaps:116/390 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 MVDSEHHVDING---------------SLRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTL 127
            |.||:...|.:|               :.|:|||||||.||::|:.||||||:|||||:.||.:|
Zfish    21 MSDSDPCEDSDGFPLNLSTSGRRSGSSAKRRRRGNLPKESVQVLRDWLYEHRFNAYPSEQEKLSL 85

  Fly   128 SQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVVGATEEVDGAGEIHEGIAN 192
            |.:.:|:|.|:||||||||||:||:::|::|.||..||:|||..|     .:...:.|.|..:  
Zfish    86 SGQTHLSVSQICNWFINARRRLLPDLLRKDGKDPTQFTMSRRTSK-----PDRSASPECHTPL-- 143

  Fly   193 VLTNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAI---------ANNPMGFQSLHSSLQATMIDK 248
                       |...::...|..:..::.:...||         :.|..|      |:||.|...
Zfish   144 -----------PRPSVICPAPTLDLRLLGNTATAILAGAGCLPSSGNQDG------SVQALMQLD 191

  Fly   249 IKNYQMRKAAA-------------IGGSAVGSGGAGGSSSNSSPATSILPYSLFGQLPPEFDDEE 300
            .:....|:..|             :..::|.|....|...|:.|.|   |..|   .|.:|.|  
Zfish   192 TRGLLRREGLAGYRREDQHFTTIPLSNTSVSSLSPIGVLLNTPPPT---PPDL---CPQDFSD-- 248

  Fly   301 KPRPPKRVRTRTVAAKSPRENAKQAKQKTGNKQETMYCYKDSYGGIVVSPRSEGEESAQGYESC- 364
                 .::.......::.:||::|.:|.|..|:.:..........|...||.|.|.:|  .|:. 
Zfish   249 -----LKLLVDAALQRAEQENSQQKEQTTKPKENSRELVLSEDRSISTPPRDESESTA--VENAV 306

  Fly   365 -------------------------GPNSEEEVRFETSHDWQSVIKTVFGTEEVSTSAGNNPGTS 404
                                     |.|..|.|.|.:|..|              :..|:.||:|
Zfish   307 LPVSVPVMSHSFSGLPVDLSTDNIIGKNLPESVGFTSSGMW--------------SVRGSAPGSS 357

  Fly   405  404
            Zfish   358  357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 109..148 CDD:283551 26/38 (68%)
LOC100535338XP_005168761.1 Homeobox_KN 67..103 CDD:283551 23/35 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587140
Domainoid 1 1.000 71 1.000 Domainoid score I9384
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1573375at2759
OrthoFinder 1 1.000 - - FOG0002434
OrthoInspector 1 1.000 - - mtm6538
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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