DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and tgif2

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_005168761.1 Gene:tgif2 / 100535338 ZFINID:ZDB-GENE-131029-1 Length:377 Species:Danio rerio


Alignment Length:390 Identity:105/390 - (26%)
Similarity:160/390 - (41%) Gaps:116/390 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 MVDSEHHVDING---------------SLRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTL 127
            |.||:...|.:|               :.|:|||||||.||::|:.||||||:|||||:.||.:|
Zfish    21 MSDSDPCEDSDGFPLNLSTSGRRSGSSAKRRRRGNLPKESVQVLRDWLYEHRFNAYPSEQEKLSL 85

  Fly   128 SQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVVGATEEVDGAGEIHEGIAN 192
            |.:.:|:|.|:||||||||||:||:::|::|.||..||:|||..|     .:...:.|.|..:  
Zfish    86 SGQTHLSVSQICNWFINARRRLLPDLLRKDGKDPTQFTMSRRTSK-----PDRSASPECHTPL-- 143

  Fly   193 VLTNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAI---------ANNPMGFQSLHSSLQATMIDK 248
                       |...::...|..:..::.:...||         :.|..|      |:||.|...
Zfish   144 -----------PRPSVICPAPTLDLRLLGNTATAILAGAGCLPSSGNQDG------SVQALMQLD 191

  Fly   249 IKNYQMRKAAA-------------IGGSAVGSGGAGGSSSNSSPATSILPYSLFGQLPPEFDDEE 300
            .:....|:..|             :..::|.|....|...|:.|.|   |..|   .|.:|.|  
Zfish   192 TRGLLRREGLAGYRREDQHFTTIPLSNTSVSSLSPIGVLLNTPPPT---PPDL---CPQDFSD-- 248

  Fly   301 KPRPPKRVRTRTVAAKSPRENAKQAKQKTGNKQETMYCYKDSYGGIVVSPRSEGEESAQGYESC- 364
                 .::.......::.:||::|.:|.|..|:.:..........|...||.|.|.:|  .|:. 
Zfish   249 -----LKLLVDAALQRAEQENSQQKEQTTKPKENSRELVLSEDRSISTPPRDESESTA--VENAV 306

  Fly   365 -------------------------GPNSEEEVRFETSHDWQSVIKTVFGTEEVSTSAGNNPGTS 404
                                     |.|..|.|.|.:|..|              :..|:.||:|
Zfish   307 LPVSVPVMSHSFSGLPVDLSTDNIIGKNLPESVGFTSSGMW--------------SVRGSAPGSS 357

  Fly   405  404
            Zfish   358  357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 25/37 (68%)
tgif2XP_005168761.1 Homeobox_KN 68..103 CDD:428673 22/34 (65%)

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