Protein Alignment vis and pbx3

DIOPT Version :10

• Sequence 1: NP_788337.1
• Gene: vis / 36372
• FlyBaseID: FBgn0033748
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_031747329.1
• Gene: pbx3 / 100495648
• XenbaseID: XB-GENE-479458
• Length: 434
• Species: Xenopus tropicalis
• Alignment Length: 275
• Identity: 69/275 - (25%)
• Similarity: 115/275 - (41%)
• Gaps: 57/275 - (20%)

  Fly    29 HVHASLLNNEGRDRFHSDSSLDQDSLHAVVGNDLSTEQGANQVQNYHDMMVDSEHHVDINGSLRK 93
            || .:||..:.|.|..|...:::  :..::....|:.|...:......:|:.....:|    .|:
 Frog   180 HV-MNLLREQSRTRPISPKEIER--MVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLD----ARR 237

  Fly    94 RRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREG 158
            :|.|..|.:.:||..:.|.|..|.|||:..|..|:::.::||.||.|||.|.|.|....:.:.:.
 Frog   238 KRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQE 302

  Fly   159 NDPLHFTISRRGKKVVGATEEVDGAGEIHE------------GIANVLTNFEQY--VQGPNGQMV 209
            ...|:     ..|..|.|...|..|.:.::            |..|:..:.:.|  :|..||
 Frog   303 EANLY-----AAKTAVNAAHAVAAAVQNNQTSSPTTPNSGSSGSFNLPNSGDMYMNMQSLNG--- 359

  Fly   210 KMEPEYEDSVIYSWQQAIANNPMGFQSLHSSLQATMIDKIKNYQMRKAAAIGGSAV-------GS 267
                   ||  |...|..||    .||...||: .:|::...|    :.|:||:::       .:
 Frog   360 -------DS--YQGAQVGAN----VQSQVDSLR-HVINQTGGY----SDALGGNSLYSPHHLNAN 406

  Fly   268 GG---AGGSSSNSSP 279
            ||   |...||.:||
 Frog   407 GGWHEAATPSSVTSP 421

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vis	NP_788337.1	Homeobox_KN	110..148	CDD:428673	17/37 (46%)
pbx3	XP_031747329.1	PBC	44..234	CDD:461052	10/56 (18%)
		homeodomain	236..296	CDD:238039	24/59 (41%)