DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and mkx

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_031760383.1 Gene:mkx / 100493638 XenbaseID:XB-GENE-853539 Length:350 Species:Xenopus tropicalis


Alignment Length:416 Identity:95/416 - (22%)
Similarity:150/416 - (36%) Gaps:156/416 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LHAVVGNDLS----TEQGANQ----VQNYHDMMVDSEHHVDI--------NGSLRKRR-GNLPKS 101
            ::|:|.|.||    .|:..|.    |:.|..:|......|.:        |.|||.|| |:...:
 Frog     1 MNAIVFNKLSGQVLFEESPNDRERGVRPYLGVMESPNADVGLQDGISIKDNASLRHRRPGSSRGA 65

  Fly   102 SVKI-------------LKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEM 153
            |.|:             ||:|||:||.|.||:..||..|:..:.:|::||.|||.||||| |...
 Frog    66 SGKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRR-LKNT 129

  Fly   154 IRR----------------EGN------------------------------DPLHFTISRRGKK 172
            :|:                :||                              .|:|.|:..:...
 Frog   130 VRQPDLSWALRIKLYNKYVQGNAERLSVSSEDSCSEDGENAPRSHHNEEAYDKPIHHTVITKESS 194

  Fly   173 VVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNPMGFQSL 237
            |            |..|:....:..|.||.         .|:|:.|:::.:             |
 Frog   195 V------------IKSGVRAESSASEDYVS---------PPKYKSSLLHRY-------------L 225

  Fly   238 HSSLQATMIDKIKNYQMRKAAAIGGSAVGSGGAGGSSSNSSPATSILPYSLFGQLPPEFDDEEKP 302
            :.||:..|   ..|..||:...      ....:|..|||                  ||  ||:.
 Frog   226 NDSLRHVM---ASNAAMREKTR------QRNHSGSFSSN------------------EF--EEEL 261

  Fly   303 RPPKRVRT------RTVAAKSPRENAKQAKQKTGNKQETMYCYKDSYGGIVVSPRSEGEESAQGY 361
            ..|....|      ||...:|.....:.|..|.|..::..| :::....:.::..::|::..||.
 Frog   262 VSPSSSETEGNFVYRTDTLESAANKCQSAVNKEGASKDETY-WREINAAMALTNLAQGKDKLQGT 325

  Fly   362 ESCGPNSEEEVRFETSHDWQSVIKTV 387
            .||       :..::||  .|.:|||
 Frog   326 TSC-------IIQKSSH--ISEVKTV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 19/37 (51%)
mkxXP_031760383.1 Homeobox_KN 87..125 CDD:428673 19/37 (51%)

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