DRSC/TRiP Functional Genomics Resources

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Protein Alignment vis and tgif2

DIOPT Version :10

Sequence 1:NP_788337.1 Gene:vis / 36372 FlyBaseID:FBgn0033748 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_002932897.1 Gene:tgif2 / 100127190 XenbaseID:XB-GENE-876497 Length:266 Species:Xenopus tropicalis


Alignment Length:128 Identity:68/128 - (53%)
Similarity:91/128 - (71%) Gaps:19/128 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SDSSLDQDSLHAVVGNDLSTEQGANQVQNYHDMMVDSEHHVDINGSLRKRRGNLPKSSVKILKRW 109
            :|..:|. |||...|.|    :|:::              :||:|:.|||||||||.:||||:.|
 Frog    11 TDHEIDH-SLHTDSGED----EGSSE--------------LDISGAKRKRRGNLPKDAVKILRDW 56

  Fly   110 LYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKK 172
            |:|||:|||||:.||.:||.:.||||||:||||||||||:|||::|::|.||..|||||:|.|
 Frog    57 LFEHRFNAYPSEQEKLSLSGQTNLTVLQICNWFINARRRVLPELLRKDGKDPNQFTISRKGGK 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
visNP_788337.1 Homeobox_KN 110..148 CDD:428673 27/37 (73%)
tgif2XP_002932897.1 Homeobox_KN 57..95 CDD:428673 27/37 (73%)

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