DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R2 and ghrhrb

DIOPT Version :10

Sequence 1:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_001331921.5 Gene:ghrhrb / 792410 ZFINID:ZDB-GENE-110127-2 Length:453 Species:Danio rerio


Alignment Length:459 Identity:127/459 - (27%)
Similarity:209/459 - (45%) Gaps:72/459 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SVDMLQRASALIGAQQGSSGGQLQNRTLQCQQQQQREEEQASLEALASGGKRILQCPSSFDSVLC 93
            :|:.:..|.||:.|...:..        ||...|::|.:..:         .:..||:.:|...|
Zfish    28 AVETIHPACALVAAHMKAQE--------QCNATQRQESQNRN---------NVTGCPTEWDEFWC 75

  Fly    94 WPRTNAGSLAVLPCFEEFK-GVHYDTTDNATRFCFPNGTWDHYSDYDRCHQNSGSIPVVPDFSPN 157
            |.....|.:..:.|.|..: .|::.       |.|.|.|.|.:::....::|  :..:|.|....
Zfish    76 WSGAEVGQVVNISCSEVSQLFVNHG-------FIFRNCTKDGWTEVYPSYEN--ACEIVEDVESE 131

  Fly   158 VELPAI-----IYAGGYFLSFATLVVALIIFLSFKDLRCLRNTIHANLFLTYITSALLWILTLFL 217
            .|....     :|..||..|..:|:.|:.:|..|:...|.||.||.|||.::|..|    ..:|:
Zfish   132 TETTYYATFRQVYTAGYATSLISLITAIFVFTVFRKFHCTRNYIHINLFASFILRA----SAIFI 192

  Fly   218 Q---VITTES------SQAGCITLVIMFQYFYLTNFFWMFVEGLYLYTLVVQTFSSDNISFIIYA 273
            :   :...|:      |...|...|..||:..|.|:||:.|||:||.||:..||.|....|..|.
Zfish   193 KDAVLFADENLDHCFMSTTSCKAAVAFFQFSILANYFWLLVEGMYLQTLLALTFVSQKKYFWWYI 257

  Fly   274 LIGWGCPAVCILVWSIAKAFAPHLENEHFNGLEIDCAWMRESHIDWIFKVPASLALLVNLVFLIR 338
            |||||.|.:.:.:|.:|:.|..:  |..::..::...|       ||.|.|.:::||:|.:..|.
Zfish   258 LIGWGLPTLILTIWVLARNFFDN--NGCWDDTDVAYFW-------WIIKGPITVSLLINFLIFIN 313

  Fly   339 IMWVLITKLRSAHT--LETRQYYKASKALLVLIPLFGITYLLVLTGPEQGISRNLFEAIRAFLI- 400
            ::.:|:.||:|...  .:|..:.:.:|:.|.||||||:.|::....||     |..|..|.||. 
Zfish   314 VIRILVQKLKSPGMGGGDTNHFMRLAKSTLFLIPLFGMHYMVFAFLPE-----NTGENARHFLEL 373

  Fly   401 ---STQGFFVALFYCFLNSEVRQTLRHGFTRWRESRNIHRNSSIKNRSTEECVICLRPSPHTRLG 462
               ..|||.|||.|||||.||:..|:....:|:....:..:...:...||...:       |::.
Zfish   374 GLGPFQGFVVALLYCFLNGEVQAELKKRLWKWQTQSYLRYSKRRRTLFTESSTV-------TQIS 431

  Fly   463 SLQR 466
            .|::
Zfish   432 VLEK 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R2NP_610789.3 HRM 82..144 CDD:397086 14/62 (23%)
7tmB1_DH_R 158..428 CDD:320391 96/289 (33%)
TM helix 1 160..185 CDD:320391 7/29 (24%)
TM helix 2 194..216 CDD:320391 8/21 (38%)
TM helix 3 230..257 CDD:320391 12/26 (46%)
TM helix 4 269..289 CDD:320391 9/19 (47%)
TM helix 5 314..343 CDD:320391 8/28 (29%)
TM helix 6 357..384 CDD:320391 9/26 (35%)
TM helix 7 390..415 CDD:320391 14/28 (50%)
ghrhrbXP_001331921.5 HRM 65..123 CDD:397086 15/66 (23%)
7tmB1_GHRHR2 137..404 CDD:320399 95/284 (33%)
TM helix 1 139..164 CDD:320399 7/24 (29%)
TM helix 2 173..195 CDD:320399 9/25 (36%)
TM helix 3 214..241 CDD:320399 12/26 (46%)
TM helix 4 253..273 CDD:320399 9/19 (47%)
TM helix 5 288..318 CDD:320399 9/36 (25%)
TM helix 6 334..361 CDD:320399 9/26 (35%)
TM helix 7 366..391 CDD:320399 12/24 (50%)

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