DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R2 and ghrhra

DIOPT Version :10

Sequence 1:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001124524.1 Gene:ghrhra / 541314 ZFINID:ZDB-GENE-050315-2 Length:432 Species:Danio rerio


Alignment Length:422 Identity:137/422 - (32%)
Similarity:200/422 - (47%) Gaps:59/422 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 CQQQQQREEEQASLEALASGGKRILQCPSSFDSVLCWPRTNAGSLAVLPCFEEFKGVHYDTTDN- 121
            |.|.::||.:..|.:.         .|.:.:|.:.||...|.|.|..:.|.:.|:  |...|.. 
Zfish    36 CIQTRKREIKNHSQQT---------GCGTDWDGIRCWHTANTGQLINVSCSDVFQ--HISNTQGF 89

  Fly   122 ATRFCFPNGTWDHYSDYDRC---HQNSGSIPVVPDFSPNVELPAIIYAGGYFLSFATLVVALIIF 183
            ..|.|..||..|.|..|:..   ..:|.|..|....|...:|    |..||..|..:|:.|:|||
Zfish    90 IYRNCVSNGWTDPYPPYEEACAFEDDSESGTVTTYLSTLKQL----YTAGYATSLISLITAVIIF 150

  Fly   184 LSFKDLRCLRNTIHANLFLTYITSALLWILTLFLQ--VITTESSQAGCI-------TLVIMFQYF 239
            ..|:...|.||.||.|||:::|..|    ..:|::  |:.::.:|..|:       :.|..||:.
Zfish   151 TCFRKFHCTRNYIHINLFVSFILRA----SAVFIKGTVLFSDETQDHCLMSTVLCKSAVTFFQFC 211

  Fly   240 YLTNFFWMFVEGLYLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWSIAKAFAPHLENEHFNG 304
            .|||:||:.||||||.||:..||.|....|..|.|||||.|:|.::||.:.:.|   .:|.    
Zfish   212 ILTNYFWLLVEGLYLQTLLALTFVSQRKYFWWYILIGWGVPSVVLVVWVLTRQF---YDNR---- 269

  Fly   305 LEIDCAW--MRESHIDWIFKVPASLALLVNLVFLIRIMWVLITKLRSAHT--LETRQYYKASKAL 365
               .| |  ...::|.||.|.|.:.:|..|::..:.::.:|:.||:|...  .:|..:.:.:|:.
Zfish   270 ---GC-WDDTDNTNIWWIIKGPITASLFTNIIIFLNVIRILVQKLKSPGVGGNDTGHFMRLAKST 330

  Fly   366 LVLIPLFGITYLLVLTGPEQGISRNLFEAIRAF----LISTQGFFVALFYCFLNSEVRQTLRHGF 426
            |.||||||:.|.|....||     |..|.||.:    |.|.|||.|||.|||||.||:..|:...
Zfish   331 LFLIPLFGMHYTLFAFLPE-----NTGEIIRFYIELGLGSFQGFVVALLYCFLNGEVQAELKRRL 390

  Fly   427 TRWRESRNIHRNSSIKNRSTEECVICLRPSPH 458
            ..|....::   |..|.|......|.:..|.|
Zfish   391 WTWLTQTHL---SPCKKRRVTVTQIMMHESAH 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R2NP_610789.3 HRM 82..144 CDD:397086 18/65 (28%)
7tmB1_DH_R 158..428 CDD:320391 103/286 (36%)
TM helix 1 160..185 CDD:320391 10/24 (42%)
TM helix 2 194..216 CDD:320391 8/21 (38%)
TM helix 3 230..257 CDD:320391 14/33 (42%)
TM helix 4 269..289 CDD:320391 11/19 (58%)
TM helix 5 314..343 CDD:320391 7/28 (25%)
TM helix 6 357..384 CDD:320391 10/26 (38%)
TM helix 7 390..415 CDD:320391 15/28 (54%)
ghrhraNP_001124524.1 HRM 52..113 CDD:397086 18/62 (29%)
7tmB1_GHRHR2 125..392 CDD:320399 104/290 (36%)
TM helix 1 127..152 CDD:320399 10/28 (36%)
TM helix 2 161..183 CDD:320399 9/25 (36%)
TM helix 3 202..229 CDD:320399 14/26 (54%)
TM helix 4 241..261 CDD:320399 11/19 (58%)
TM helix 5 277..306 CDD:320399 7/28 (25%)
TM helix 6 322..349 CDD:320399 10/26 (38%)
TM helix 7 354..379 CDD:320399 13/24 (54%)

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