DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R2 and Vipr2

DIOPT Version :9

Sequence 1:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_058934.2 Gene:Vipr2 / 29555 RGDID:3962 Length:437 Species:Rattus norvegicus


Alignment Length:424 Identity:131/424 - (30%)
Similarity:198/424 - (46%) Gaps:54/424 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 REEEQASLEALASGGKRILQCPSSFDSVLCWPRTNAGSLAVLPCFEEFKGVHYDTTDNATRFCFP 128
            :|||....|.|:|..:....|...:|::.||...:.|....:||.:.|.. .|....|.::.|..
  Rat    31 QEEETKCAELLSSQMENHRACSGVWDNITCWRPADIGETVTVPCPKVFSN-FYSRPGNISKNCTS 94

  Fly   129 NGTWDHYSDY-DRCHQNSGSIPVVPDFSPNVE---LPAIIYAGGYFLSFATLVVALIIFLSFKDL 189
            :|..:.:.|: |.|..|.      |:....:.   |...||..||.:|..:|....||...|:.|
  Rat    95 DGWSETFPDFIDACGYND------PEDESKITFYILVKAIYTLGYSVSLMSLTTGSIIICLFRKL 153

  Fly   190 RCLRNTIHANLFLTYITSAL--------LWILTLFLQVITTESSQAGCITLVIMFQYFYLTNFFW 246
            .|.||.||.||||:::..|:        |:..:..|:......|..||...::.|||..:.||:|
  Rat   154 HCTRNYIHLNLFLSFMLRAISVLVKDSVLYSSSGTLRCHDQPGSWVGCKLSLVFFQYCIMANFYW 218

  Fly   247 MFVEGLYLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWSIAKAFAPHLENEHFNGLEIDCAW 311
            :.||||||:||:|....... .|:.|.|||||.|:|||..|...:.           .||....|
  Rat   219 LLVEGLYLHTLLVAILPPSR-CFLAYLLIGWGIPSVCIGAWIATRL-----------SLEDTGCW 271

  Fly   312 MRESHID--WIFKVPASLALLVNLVFLIRIMWVLITKLRSAHT--LETRQYYKASKALLVLIPLF 372
            ....|..  |:.::|..::::||....|.|:.:|:.||.|...  .:..||.:.:|:.|:|||||
  Rat   272 DTNDHSIPWWVIRMPILISIVVNFALFISIVRILLQKLTSPDVGGNDQSQYKRLAKSTLLLIPLF 336

  Fly   373 GITYLLVLTGPEQGISRN---LFE-AIRAFLISTQGFFVALFYCFLNSEVRQTLRHGFTRWR--- 430
            |:.|::....| .|||..   ||| .:.:|    ||..||:.||||||||:..|:.   |||   
  Rat   337 GVHYMVFAAFP-IGISSTYQILFELCVGSF----QGLVVAVLYCFLNSEVQCELKR---RWRGLC 393

  Fly   431 ----ESRNIHRNSSIKNRSTEECVICLRPSPHTR 460
                .||:...:|...:|:..|..:.:.....|:
  Rat   394 LTQPGSRDYRLHSWSMSRNGSESALQIHRGSRTQ 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R2NP_610789.3 HRM 82..144 CDD:280888 15/62 (24%)
7tm_2 159..407 CDD:278432 88/266 (33%)
Vipr2NP_058934.2 HormR 47..117 CDD:214468 17/76 (22%)
7tmB1_VIP-R2 122..390 CDD:320652 100/287 (35%)
TM helix 1 125..149 CDD:320652 8/23 (35%)
TM helix 2 158..179 CDD:320652 8/20 (40%)
TM helix 3 202..224 CDD:320652 8/21 (38%)
TM helix 4 242..258 CDD:320652 10/15 (67%)
TM helix 5 276..299 CDD:320652 5/22 (23%)
TM helix 6 326..348 CDD:320652 10/22 (45%)
TM helix 7 353..378 CDD:320652 11/28 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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