DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R2 and Pth1r

DIOPT Version :9

Sequence 1:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_036010598.1 Gene:Pth1r / 19228 MGIID:97801 Length:745 Species:Mus musculus


Alignment Length:512 Identity:141/512 - (27%)
Similarity:222/512 - (43%) Gaps:108/512 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDLRALVDSLDDASQEDLAKVIANFSVDMLQRASA---LIGAQQGSSGGQLQNRTLQCQQQQQRE 65
            :.:..:||:.|..::|:        .:.:|.||.|   .:..:...:..|...||.........|
Mouse   162 EHMALVVDADDVFTKEE--------QIFLLHRAQAQCDKLLKEVLHTAAQPMARTTPISPANIME 218

  Fly    66 EEQASLEALASGGKRILQCPSSF-------------------------DSVLCWPRTNAGSLAVL 105
            .::....|..||..|..:.|..|                         |:::|||....|.:..:
Mouse   219 SDKGWTPASTSGKPRKEKAPGKFYPESKENKDVPTGSRRRGRPCLPEWDNIVCWPLGAPGEVVAV 283

  Fly   106 PCFEEFKGVHYDTT--DNATRFCFPNGTWD----H---YSDYDRCHQNSGSIPVVPDFSPN---- 157
            ||.:..    ||..  .:|.|.|..||:|:    |   :::|..|.:          |..|    
Mouse   284 PCPDYI----YDFNHKGHAYRRCDRNGSWEVVPGHNRTWANYSECLK----------FMTNETRE 334

  Fly   158 ---VELPAIIYAGGYFLSFATLVVALIIFLSFKDLRCLRNTIHANLFLT--------YITSALLW 211
               .:...:||..||.:|.|:|.||::|...|:.|.|.||.||.::||:        ::..|:|:
Mouse   335 REVFDRLGMIYTVGYSMSLASLTVAVLILAYFRRLHCTRNYIHMHMFLSFMLRAASIFVKDAVLY 399

  Fly   212 I--------------LTLFLQV----ITTESSQAGCITLVIMFQYFYLTNFFWMFVEGLYLYTLV 258
            .              |.:..||    .......|||...|..|.||..||::|:.||||||::|:
Mouse   400 SGFTLDEAERLTEEELHIIAQVPPPPAAAAVGYAGCRVAVTFFLYFLATNYYWILVEGLYLHSLI 464

  Fly   259 VQTFSSDNISFIIYALIGWGCPAVCILVWSIAKAFAPHLENEHFNGLEIDCAWMRESHIDWIFKV 323
            ...|.|:......:.:.|||.|||.:.||...:|   .|.|       ..|..:...|..||.:|
Mouse   465 FMAFFSEKKYLWGFTIFGWGLPAVFVAVWVGVRA---TLAN-------TGCWDLSSGHKKWIIQV 519

  Fly   324 PASLALLVNLVFLIRIMWVLITKLR--SAHTLETRQYY-KASKALLVLIPLFGITYLLVLTGPEQ 385
            |...::::|.:..|.|:.||.||||  :|...:|||.| |..::.|||:||||:.|.:.:..|..
Mouse   520 PILASVVLNFILFINIIRVLATKLRETNAGRCDTRQQYRKLLRSTLVLVPLFGVHYTVFMALPYT 584

  Fly   386 GISRNLFEA---IRAFLISTQGFFVALFYCFLNSEVRQTLRHGFTRWRESRNIHRNS 439
            .:|..|::.   ......|.||||||:.|||.|.||:..:|..::||..:.:..|.:
Mouse   585 EVSGTLWQIQMHYEMLFNSFQGFFVAIIYCFCNGEVQAEIRKSWSRWTLALDFKRKA 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R2NP_610789.3 HRM 82..144 CDD:280888 20/95 (21%)
7tm_2 159..407 CDD:278432 90/279 (32%)
Pth1rXP_036010598.1 PHA03247 <6..113 CDD:223021
HRM 259..324 CDD:397086 17/68 (25%)
7tm_GPCRs 338..630 CDD:421689 100/301 (33%)
TM helix 1 340..365 CDD:410628 10/24 (42%)
TM helix 2 374..396 CDD:410628 5/21 (24%)
TM helix 3 436..463 CDD:410628 13/26 (50%)
TM helix 4 475..495 CDD:410628 8/19 (42%)
TM helix 5 510..539 CDD:410628 8/28 (29%)
TM helix 6 556..583 CDD:410628 10/26 (38%)
TM helix 7 592..617 CDD:410628 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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