DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R2 and seb-3

DIOPT Version :9

Sequence 1:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_510496.1 Gene:seb-3 / 181598 WormBaseID:WBGene00007664 Length:454 Species:Caenorhabditis elegans


Alignment Length:442 Identity:119/442 - (26%)
Similarity:194/442 - (43%) Gaps:98/442 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 CQQQQQREEEQASLEALASGGKRILQCPSSFDSVLCWPRTNAGS----------LAVLPCFEEFK 112
            ||:.::.|....:     .||     |...||..|||...:.|.          ...:|..||.|
 Worm    12 CQELKKLENSSYN-----PGG-----CSVDFDKSLCWASAHIGQQMTRDCPFTFCTAIPGCEEIK 66

  Fly   113 GVHYDTTDNATRFCFPNGTWDHYSDYDRCHQNSGSIPVVPDFS----------PNVELPAIIYAG 167
            ..:.     .:|.|...|.|.. |:|..|      |.||.:::          |:| |..::.:.
 Worm    67 DRYM-----VSRNCNSMGVWQD-SNYTMC------IKVVEEYAQCLQGFCRVCPDV-LRDLVISV 118

  Fly   168 GYFLSFAT---LVVALIIFLSFKDLRCLRNTIHANLFLTYI-TSALLWILTLFLQVITTESSQAG 228
            ...|||.:   ||.|:::|..|..::|.|.:||.||...:: ..|:|.|.|:   |.||...| .
 Worm   119 SLTLSFVSVILLVAAIVLFSIFDSIQCRRLSIHKNLATAFVFRFAVLAIWTI---VQTTNVFQ-D 179

  Fly   229 CITL--------------VIMFQ-YFYLTNFFWMFVEGLYLYT-LVVQTFSSDNISFIIYALIGW 277
            |..|              ::.|. ||.:.:..||.:||.:||: ..|......:..:.:|...||
 Worm   180 CTRLTPLPLWDYEWICKAILWFVIYFNVASVMWMLIEGAFLYSRFTVFAMRHSDAPWSLYLACGW 244

  Fly   278 GCPAVCILVWSIAKAFAPHLENEHFNGLEIDCAWM---RESHIDWIFKVPASLALLVNLVFLIRI 339
            |.|.|.:..|::...:....:...|       .|:   :..|: ||.......||::||:||:.|
 Worm   245 GVPFVVVTAWALVHQYISSQQTNSF-------CWLPYAQGLHL-WILAGTMGSALIMNLIFLLMI 301

  Fly   340 MWVLITKLRSAHTLETRQYYKASKALLVLIPLFGITYLLVLTGPEQGISRNLFEAIRAFLISTQG 404
            :.:|:.|||:.::.|:::.::..||.|:|:||.||:.:.:...||...|  ::....|.|..:||
 Worm   302 VVILVQKLRTENSAESKKIWRTIKATLLLVPLLGISNIPLFYEPEHPSS--VYMLGSAILQHSQG 364

  Fly   405 FFVALFYCFLNSEVRQTLRHGF---------TRWR---------ESRNIHRN 438
            .|:|:.|||||||::..|:...         ||.|         |:||..:|
 Worm   365 IFIAVLYCFLNSEIQGALKRQLSKVPFEFFKTRNRFETERTYVPEARNATKN 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R2NP_610789.3 HRM 82..144 CDD:280888 18/71 (25%)
7tm_2 159..407 CDD:278432 74/270 (27%)
seb-3NP_510496.1 HRM 27..90 CDD:280888 19/79 (24%)
7tm_4 125..367 CDD:304433 70/255 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164016
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H20920
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5470
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002345
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2715
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.680

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