DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R2 and pdfr-1

DIOPT Version :9

Sequence 1:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001021170.1 Gene:pdfr-1 / 175942 WormBaseID:WBGene00015735 Length:546 Species:Caenorhabditis elegans


Alignment Length:487 Identity:120/487 - (24%)
Similarity:203/487 - (41%) Gaps:93/487 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LAKVIANFSVDMLQRASALIGAQQGSSGGQLQNRTLQCQQQQQREEEQASLEALASGGKRILQ-- 83
            :|...:.|:|.:|..::.|  ::...||..:    |.....|...|....||......|::|.  
 Worm     1 MADATSPFNVSILDNSTKL--SEMVESGWNV----LASTSVQAFNEAMDVLEESYPLCKKMLDHN 59

  Fly    84 --------------CPSSFDSVLCWPRTNAGSLAVLPCFEEFKGVHYDTTDNATRFCFPNGTWD- 133
                          |.:::|:|||||.|.|.|...|.| ...||:  |...|.|:.|..:|.|. 
 Worm    60 NLFPERDPNDTRIWCNATYDTVLCWPPTPANSSVTLQC-PHMKGL--DPNKNITKDCHVSGVWSG 121

  Fly   134 -----------HYSDYDRCHQ----------NSGSIPVVPDFSPNVELPAIIYAGGYFLSFATLV 177
                       .::::..|:.          |:.|:.:..:.:.|......:   |..||..:|:
 Worm   122 RNAGEMGPTLPGWTNFTMCYTDEVIYIMQNLNNESLTIAQEVARNARKLEFV---GLGLSLVSLI 183

  Fly   178 VALIIFLSFKDLRCLRNTIHANLFLTYITSALLWILTLFLQVITT------ESSQAG-------- 228
            :|:.||..|:.||..||.:|.:|.:..:...:| .|.|::.:|.|      .:|..|        
 Worm   184 LAISIFSYFRRLRVFRNLLHLHLMIAMLMVVIL-RLVLYIDLIFTGENGPHTNSAEGKTINTMPI 247

  Fly   229 -CITLVIMFQYFYLTNFFWMFVEGLYLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWSIAKA 292
             |..:....:||....|.|||:||:||...:|..|.:.....:.|.:.|:|.|.|..::|.:...
 Worm   248 VCEGMFFFLEYFKTVTFCWMFLEGIYLNNQIVFGFFNSEPKLLPYFIAGYGIPLVHTMLWLLVVL 312

  Fly   293 FAPHLENEHFNGLEIDCAWMRESHIDWIFKVPASLALLVNLVFLIRIMWVLITKLRSAHTLETRQ 357
            .....:.|...|     ::..|... ||...|....|::||.|:..::.||.:|:|.::......
 Worm   313 IKKDFKVERCLG-----SYYLEPEF-WILDGPRMAELVINLFFICNVIRVLYSKVRESNNTSEAG 371

  Fly   358 YYKASKALLVLIPLFGITYLL--VLTGPEQGISRNLFEAIRAFLIST---------QGFFVALFY 411
            ..|:.||.::|:||.|:..::  :...|.:       :.|..|.:.|         ||..||..|
 Worm   372 LKKSVKAAMMLLPLLGVPNIMQTIPFAPTR-------DNIMVFAVWTYTASFTYMYQGLMVASIY 429

  Fly   412 CFLNSEVRQTLRHGFTRWR---ESRNIHRNSS 440
            ||.|.||...|:..:.|:|   :|:|..|..|
 Worm   430 CFTNKEVNHVLKTFYARYRLLHKSQNELRRGS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R2NP_610789.3 HRM 82..144 CDD:280888 22/99 (22%)
7tm_2 159..407 CDD:278432 67/273 (25%)
pdfr-1NP_001021170.1 HRM 74..143 CDD:280888 21/71 (30%)
7tm_2 164..425 CDD:278432 68/277 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2715
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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