DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R2 and Ghrhr

DIOPT Version :9

Sequence 1:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_036021736.1 Gene:Ghrhr / 14602 MGIID:95710 Length:444 Species:Mus musculus


Alignment Length:334 Identity:102/334 - (30%)
Similarity:138/334 - (41%) Gaps:49/334 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GGQLQNRTLQCQ-QQQQREEEQASLEALASGGKRILQCPSSFDSVLCWPRTNAGSLAVLPCFEEF 111
            |..|.:..|:|. ..|.|::|.|.|:|........|.||.::|.:||||.|.:|....|||.|.|
Mouse    18 GVTLGHLHLECDFITQLRDDELACLQAAEGTNNTSLGCPGTWDGLLCWPPTGSGQWVSLPCPEFF 82

  Fly   112 KGVHYDT-TDNATRFCFPNGTWDHYSDYDRCHQNSGSIPVVPDFSP-NVEL----------PAII 164
            .  |:.: |....|.|...| |            |...|..|...| .:||          ..||
Mouse    83 S--HFGSDTGFVKRDCTITG-W------------SNPFPPYPVACPVPLELLTKEKSYFSTVKII 132

  Fly   165 YAGGYFLSFATLVVALIIFLSFKDLRCLRNTIHANLFLTYITSALLWIL---TLFLQVITTESSQ 226
            |..|:.:|...|.||:.|.::.:.|.|.||.||..||.|:|..|....|   .:|....|...|.
Mouse   133 YTTGHSISIVALCVAIAILVALRRLHCPRNYIHTQLFATFILKASAVFLKDAAIFQGDSTDHCSM 197

  Fly   227 AG--CITLVIMFQYFYLTNFFWMFVEGLYLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWSI 289
            :.  |...|.:.....:|||.|:..|.:||..|:..|......:|....|.|||.|.:|...|..
Mouse   198 STVLCKVSVAISHLATMTNFSWLLAEAVYLSCLLASTSPRSKPAFWWLVLAGWGLPVLCTGTWVG 262

  Fly   290 AK-AFAPHLENEHFNGLEIDCAW--MRESHIDWIFKVPASLALLVNLVFLIRIMWVLITKLRSAH 351
            .| ||.           :.:| |  ...|...||.|.|..|::.||....:.|:.:|:.||..|.
Mouse   263 CKLAFE-----------DTEC-WDLDNSSPCWWIIKGPIVLSVGVNFGLFLNIICILLRKLEPAQ 315

  Fly   352 -TLETRQYY 359
             .|.||..|
Mouse   316 GGLHTRAQY 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R2NP_610789.3 HRM 82..144 CDD:280888 21/62 (34%)
7tm_2 159..407 CDD:278432 67/220 (30%)
GhrhrXP_036021736.1 HRM 53..112 CDD:397086 24/73 (33%)
7tm_GPCRs 126..>325 CDD:421689 65/211 (31%)
TM helix 1 128..153 CDD:410628 9/24 (38%)
TM helix 2 162..184 CDD:410628 9/21 (43%)
TM helix 3 203..230 CDD:410628 8/26 (31%)
TM helix 4 242..262 CDD:410628 8/19 (42%)
TM helix 5 278..307 CDD:410628 9/28 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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