DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh44-R2 and sctr

DIOPT Version :9

Sequence 1:NP_610789.3 Gene:Dh44-R2 / 36368 FlyBaseID:FBgn0033744 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001243568.1 Gene:sctr / 100537567 -ID:- Length:446 Species:Danio rerio


Alignment Length:428 Identity:129/428 - (30%)
Similarity:205/428 - (47%) Gaps:60/428 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 REEEQASLEALASGGKRILQCPSSFDSVLCWPRTNAGSLAVLPC--FEEFKG-VHYDTTDNATRF 125
            ::|.:....:..:|      |.:.:|.:.||||..||.....||  |...|| |..:.|:|....
Zfish    48 KQENRTESSSTHTG------CSALWDDLNCWPRAEAGETVSQPCPSFLRVKGAVMKNCTENGWSV 106

  Fly   126 CFP-------NGTWDHYSDYDRCHQNSGSIPVVPDFSPNVELPAIIYAGGYFLSFATLVVALIIF 183
            .||       :|..|.:      |..|.|:.|..::...|:   |:|:.||.:|..:|.:||.:.
Zfish   107 TFPPYELACGHGLNDSF------HFPSDSVLVSDEYFFYVK---IMYSAGYAVSLVSLSIALTVL 162

  Fly   184 LSFKDLRCLRNTIHANLFLTYITSALLWILTLFLQVITTESSQ---------AGCITLVIMFQYF 239
            ..|:.|.|.||.||..|||::|..||.    :|::......||         .||...:.:..|.
Zfish   163 CVFRKLHCTRNFIHMQLFLSFILRALF----IFIRDAALHYSQEYYHCNSHPPGCKVALFLSNYC 223

  Fly   240 YLTNFFWMFVEGLYLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWSIAKAFAPHLENEHFNG 304
            .|.|:.|:.||..||::|:..:..|.......|.|:|||.|.:.|:.||:||..       |.| 
Zfish   224 ILANYSWLLVEAHYLHSLINLSLRSQKKRLHWYILLGWGIPMLIIISWSLAKYL-------HQN- 280

  Fly   305 LEIDCAWMRESH--IDWIFKVPASLALLVNLVFLIRIMWVLITKLRSA--HTLETRQYYKASKAL 365
               :..|....|  |.||.:||..:.:.||::|.:.|:..|:.||::|  |..|...:.|.:|:.
Zfish   281 ---EGCWETRDHGWIWWILRVPVIIFITVNMLFFLSIIRTLVGKLKAADMHGNEINHHRKLAKST 342

  Fly   366 LVLIPLFGITYLLVLTGPEQ--GISRNLFEAIRAFLISTQGFFVALFYCFLNSEVRQTLRHGFTR 428
            .:|:.|||:.|:|....|::  .::..::..|...|.|||||.|||.|||||.||:..::..:.|
Zfish   343 FLLVSLFGLQYVLFAFFPDRVSVLTFKIWNVIELALASTQGFIVALLYCFLNGEVQYEVQRRWRR 407

  Fly   429 WRESRNIH-----RNSSIKNRSTEECVICLRPSPHTRL 461
            ||..::.|     .:||:.|.......:.|...|:|::
Zfish   408 WRLKQHFHGEPRVHHSSLSNSGLPLTQVSLLTRPNTQI 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh44-R2NP_610789.3 HRM 82..144 CDD:280888 21/71 (30%)
7tm_2 159..407 CDD:278432 82/262 (31%)
sctrNP_001243568.1 HRM 59..117 CDD:280888 19/63 (30%)
7tm_2 140..386 CDD:278432 83/263 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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