DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8545 and NCL1

DIOPT Version :9

Sequence 1:NP_610786.2 Gene:CG8545 / 36365 FlyBaseID:FBgn0033741 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_009529.1 Gene:NCL1 / 852257 SGDID:S000000120 Length:684 Species:Saccharomyces cerevisiae


Alignment Length:475 Identity:118/475 - (24%)
Similarity:174/475 - (36%) Gaps:127/475 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 KRYRQADRSRGEYIDLLRRDLCLYYSYNEFLME--------KLMDMLPLTELMEYLEASEIARPL 361
            |.:...|.||.:            .:::|.:.|        |.:.:.|..:..|:.:..:...||
Yeast    13 KTFGARDDSRAQ------------KNWSELVKENEKWEKYYKTLALFPEDQWEEFKKTCQAPLPL 65

  Fly   362 TIR-----------TNTLKTRRR------DLAGALINRGVNL----DPLGKWTKVGLVVFNSQVP 405
            |.|           .|..|.|..      :..|..|...|.|    |.|.....|...|......
Yeast    66 TFRITGSRKHAGEVLNLFKERHLPNLTNVEFEGEKIKAPVELPWYPDHLAWQLDVPKTVIRKNEQ 130

  Fly   406 LGATPEYL-----AGHYMIQGASSLLPVMALAPQENERILDMCSAPGGKGSH-IASIMKNT---- 460
            ...|..:|     .|:...|.|.|::|.:.|..:.:..:||||:|||.|.:. |.::.|:|    
Yeast   131 FAKTQRFLVVENAVGNISRQEAVSMIPPIVLEVKPHHTVLDMCAAPGSKTAQLIEALHKDTDEPS 195

  Fly   461 GVLFANDSNRDRIKAIVANFHRLGIVNAVVSCEDGTKF-----------RNIMTGFDRVLLDAPC 514
            |.:.|||::..|...:|....||...|.:|...|...|           :|.:..|||:|.|.||
Yeast   196 GFVVANDADARRSHMLVHQLKRLNSANLMVVNHDAQFFPRIRLHGNSNNKNDVLKFDRILCDVPC 260

  Fly   515 TGTGVVSKDPSVKTTKSEVDVQRCYNLQRKLLLTAIDCTDAKS-----STGGYIVYSTCSVLPEE 574
            :|.|         |.:..|:|.:.:|.|..|.|.|:.......     ...|.:||||||:.|.|
Yeast   261 SGDG---------TMRKNVNVWKDWNTQAGLGLHAVQLNILNRGLHLLKNNGRLVYSTCSLNPIE 316

  Fly   575 NEWVIDYALKKRNVKLVPTGLDFGVEGFTKFR-----------------------QHRFHPS--- 613
            ||.|:..||:|...|:.....|..:.|..:.:                       ...|.||   
Yeast   317 NEAVVAEALRKWGDKIRLVNCDDKLPGLIRSKGVSKWPVYDRNLTEKTKGDEGTLDSFFSPSEEE 381

  Fly   614 ---LNLTK--RYYPHTHNMDGFYVAKLKKFSNTIPITKEQQEEDEKQLDEAIEADATTEAAAESE 673
               .||..  |.|||..|..||::...:|.              |...:.|.|..::...|.|||
Yeast   382 ASKFNLQNCMRVYPHQQNTGGFFITVFEKV--------------EDSTEAATEKLSSETPALESE 432

  Fly   674 EVE------EEVASKEKGPR 687
            ..:      |||..||:.||
Yeast   433 GPQTKKIKVEEVQKKERLPR 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8545NP_610786.2 Methyltr_RsmF_N 333..424 CDD:293730 25/124 (20%)
nop2p 363..637 CDD:188051 91/351 (26%)
Nol1_Nop2_Fmu 428..636 CDD:279522 72/259 (28%)
NCL1NP_009529.1 RsmB 1..411 CDD:223222 103/418 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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