DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8545 and AT1G06560

DIOPT Version :10

Sequence 1:NP_610786.2 Gene:CG8545 / 36365 FlyBaseID:FBgn0033741 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_172143.3 Gene:AT1G06560 / 837167 AraportID:AT1G06560 Length:599 Species:Arabidopsis thaliana


Alignment Length:379 Identity:96/379 - (25%)
Similarity:143/379 - (37%) Gaps:133/379 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 RDLAGALINRGVNLDPLGKWTKV--GLVV-FNSQV-PLGATPEYLAGHYMIQGASSLLPVMALAP 433
            |:.:|..|..|..:.......:|  |:.| .|.:| .|.:....|.|...:|...|::...||.|
plant   230 RERSGLYIGMGTAMLSRAGMFRVPNGIAVDLNHRVFRLPSLHNILEGEIFLQNLPSIIVAHALDP 294

  Fly   434 QENERILDMCSAPGGKGSHIASIMKNTGVLFANDSNRDRIKAIVANFH-----------RLGIVN 487
            |:.|||||||:|||||.:.||.:|.:.|.:.|.|.:.::: .:|.|..           :|..:.
plant   295 QKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKV-LVVQNLSAEMGFTCITTCKLDALK 358

  Fly   488 AVV--------------------------------------------SCE--DGTKFRN------ 500
            :|.                                            |||  |.|:..|      
plant   359 SVCLPTTLNESTILINGDNSSSMTSHSELSSNEEMTSVTSRRSEADKSCEKNDSTEQPNGGDNVS 423

  Fly   501 ----------IMTG---------------------FDRVLLDAPCTGTGVVSKDPSVKTTKSEVD 534
                      :..|                     ||||||||||:..|:  :.......::.|.
plant   424 QAYIRKNKGRLKNGRGRTQCQGGRAGKSQGFPPNSFDRVLLDAPCSALGL--RPRLFAGLETVVS 486

  Fly   535 VQRCYNLQRKLLLTAIDCTDAKSSTGGYIVYSTCSVLPEENEWVIDYALKK-RNVKLVP------ 592
            ::.....|||:|..|:...    ..||.:|||||::.|.|||.|:.|||.| |.:.|.|      
plant   487 LRNHGWYQRKMLDQAVQLV----RVGGILVYSTCTINPSENEAVVRYALDKYRFLSLAPQHPRIG 547

  Fly   593 -TGL-------DFGVEGFTKFRQ----HRFHPSLNLTKRYYPHTHNMDGFYVAK 634
             .||       |..:|.:.|..:    .:|.||..|         :..||::||
plant   548 GPGLVGRCEFPDGYIEEWLKPGEEELVQKFDPSSEL---------DTIGFFIAK 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8545NP_610786.2 nop2p 363..637 CDD:188051 96/379 (25%)
PRK13808 <745..886 CDD:172341
AT1G06560NP_172143.3 PUA_NSun6-like 159..264 CDD:409292 8/33 (24%)
RsmB <252..593 CDD:439914 92/357 (26%)
Blue background indicates that the domain is not in the aligned region.

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