DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8545 and AT4G40000

DIOPT Version :10

Sequence 1:NP_610786.2 Gene:CG8545 / 36365 FlyBaseID:FBgn0033741 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_195710.3 Gene:AT4G40000 / 830161 AraportID:AT4G40000 Length:783 Species:Arabidopsis thaliana


Alignment Length:589 Identity:126/589 - (21%)
Similarity:213/589 - (36%) Gaps:173/589 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 KKREAEEAQLADDEMLETVDKQDVF-----QLPV----EGEETEKDLTLQEVQQRIKDVSLVL-- 301
            |:.:.|.:.  ||.:.:.:..:..|     |.|:    ..||..|:..:.:.|:....:..:.  
plant    13 KRNQIENSN--DDNVRKPLKSEASFDSNNLQKPICSNLHFEEYYKEQRIVKAQEWDSFMEFLRKP 75

  Fly   302 --SDFKRYRQADRSRGEYIDLLRRDLCLYYSYNEFLMEKLMDMLPLTELMEYLEASEIARPLTIR 364
              :.|:.|     |.|::.|.:|..|     .|:|::....:.:...||       |..:||...
plant    76 LPAAFRVY-----SNGQFCDEIRLKL-----ENDFMISLQAEAIESGEL-------EAIKPLPWY 123

  Fly   365 TNTL----KTRRRDLAGALINRGVNLDPLGKWTKVGLVVFNSQVPLGATPEYLAGHYMIQGASSL 425
            ...|    ...|::     |.:...|:...::.|:               |..||:...|.:.|:
plant   124 PKNLAWHSNFSRKE-----IRKNQTLERFHEFLKL---------------ETEAGNMTRQESVSM 168

  Fly   426 LPVMALAPQENERILDMCSAPGGKGSHIASIMKNT--------GVLFANDSNRDRIKAIVANFHR 482
            :|.:.|....:..:||||:|||.|...:..|:..:        |::.|||.:..|...::....|
plant   169 VPPLFLDVHPDHFVLDMCAAPGSKTFQLLEIIHESSEPGSLPNGMVVANDVDYKRSNLLIHQTKR 233

  Fly   483 LGIVNAVVSCEDGTKFRNIMTG------------------FDRVLLDAPCTGTGVVSKDPSVKTT 529
            ....|.:|:..:|..|.:..|.                  |||||.|.||:|.|.:.|.|.:...
plant   234 TCTTNLMVTNNEGQHFPSCNTKRTLSVASETNPHPIDQLLFDRVLCDVPCSGDGTLRKAPDIWRR 298

  Fly   530 KSEVDVQRCYNLQRKLLLTAIDCTDAKSSTGGYIVYSTCSVLPEENEWVIDYALKK--RNVKLVP 592
            .:.......::||..|.:..:...    ..||.:||||||:.|.|:|.|:...|::  .:|:||.
plant   299 WNSGSGNGLHSLQVVLAMRGLSLL----KVGGRMVYSTCSMNPIEDEAVVAEILRRCGCSVELVD 359

  Fly   593 TGLDFGVE-----GFTKFRQH----------------------RFHPS----------------- 613
            .. |...|     |.||::.|                      ...||                 
plant   360 VS-DKLPELIRRPGLTKWKVHDRGGWYRSYKDVPKSQRDGVLRSMFPSGKSDKDSSGGKNSYEEM 423

  Fly   614 ----------------LNLTKRYYPHTHNMDGFYVAKLKKFSNTIPITKEQQEEDEKQ------- 655
                            |.|..|..||..|..||::|.|.|.|   |:...|::..:|:       
plant   424 ASISSDESAEEVCDLPLELCMRILPHDQNTGGFFIAVLHKVS---PLPDFQEKVTQKRNLSTRNN 485

  Fly   656 --------LDEAIEADATTEAAAESEEVEEEVASKEKG--PRKLLGKRAGKPSFTEIEQELK--K 708
                    ..||:.....|:....:||:..|....|.|  |.::  :........|:.|:|.  :
plant   486 INSSEKSSSYEAVSDTVVTKPEEGTEEIVLEATVSENGFEPPEM--ESTWNEGIVELAQKLDDIE 548

  Fly   709 KKRE 712
            .|||
plant   549 GKRE 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8545NP_610786.2 nop2p 363..637 CDD:188051 81/365 (22%)
PRK13808 <745..886 CDD:172341
AT4G40000NP_195710.3 RsmB <57..465 CDD:439914 97/449 (22%)
Blue background indicates that the domain is not in the aligned region.

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